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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001111000
- symbol?: —
- synonym:
- description?: nucleoside hydrolase
- nucleoside hydrolase
- inosine-uridine preferring nucleoside hydrolase
- inosine-uridine preferring nucleoside hydrolase family protein, putative
- putative inosine-uridine preferring nucleosidehydrolase
- cytidine/uridine-specific hydrolase
- inosine/uridine-preferring nucleoside hydrolase
- inosine-uridine preferring nucleoside hydrolase family protein
- purine nucleosidase
- pyrimidine-specific ribonucleoside hydrolase rihA
- pyrimidine-specific ribonucleoside hydrolase RihA (Cytidine/uridine-specific hydrolase)
- ribosylpyrimidine nucleosidase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1388087..1389022
- synteny block?: BlockID0006310
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0243
08BA02176:
C248_0229
11819-97:
MS7_0230 (rihA)
6850:
RSAU_000188
71193:
ST398NM01_0255
ECT-R 2:
ECTR2_204
ED133:
SAOV_0181
ED98:
SAAV_0209
HO 5096 0412:
SAEMRSA15_02020
JH1:
SaurJH1_0234
JH9:
SaurJH9_0228
JKD6008:
SAA6008_00215 (rihA)
JKD6159:
SAA6159_00220 (rihA)
LGA251:
SARLGA251_02070
M013:
M013TW_0223
MRSA252:
SAR0236
MSHR1132:
SAMSHR1132_02110
MSSA476:
SAS0219
Mu3:
SAHV_0242
Mu50:
SAV0243
MW2:
MW0219
RF122:
SAB0182
ST398:
SAPIG0255
T0131:
SAT0131_00234
TCH60:
HMPREF0772_10260 (rihA)
TW20:
SATW20_02450
USA300_TCH1516:
USA300HOU_0253
VC40:
SAVC_00955
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDKNTTNALNVLDIMGRQ
N315 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDKNTTNALNVLDIMGRQ
NCTC8325 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDKNTTNALNVLDIMGRQ
Newman MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDKNTTNALNVLDIMGRQ
USA300_FPR3757 MKRKIIMDCDPGHDDAIALILAGAIDSPLEILAVTTVAGNQSVDKNTTNALNVLDIMGRQ
************************************************************
COL DIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAVAMPASDVIINKVMTSDTP
N315 DIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAVAMPASDVIINKVMTSDTP
NCTC8325 DIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAVAMPASDVIINKVMTSDTP
Newman DIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAVAMPASDVIINKVMTSDTP
USA300_FPR3757 DIAVAKGADRPLIKPAAFASEIHGESGLDGPKLPSTPSRQAVAMPASDVIINKVMTSDTP
************************************************************
COL VTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPTAEFNIWVDAEAAKRVFE
N315 VTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPTAEFNIWVDAEAAKRVFE
NCTC8325 VTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPTAEFNIWVDAEAAKRVFE
Newman VTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPTAEFNIWVDAEAAKRVFE
USA300_FPR3757 VTIVATGPLTNVATALIREPRIAEHIESITLMGGGTFGNWTPTAEFNIWVDAEAAKRVFE
************************************************************
COL SGITINVFGLDVTHQVLADDHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIH
N315 SGITINVFGLDVTHQVLADNHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIH
NCTC8325 SGITINVFGLDVTHQVLADDHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIH
Newman SGITINVFGLDVTHQVLADDHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIH
USA300_FPR3757 SGITINVFGLDVTHQVLADDHVIERFESINNPVAQFVVELLQFFKKTYKTHFNMDGGPIH
*******************:****************************************
COL DACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHVTGKPANAYFATAVDVEEVW
N315 DACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHVTGKPANAYFATAVDVEEVW
NCTC8325 DACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHVTGKPANAYFATAVDVEEVW
Newman DACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHVTGKPANAYFATAVDVEEVW
USA300_FPR3757 DACTILYLLQPELFTMVPVNIDIEHQSPLTYGTMAVDLNHVTGKPANAYFATAVDVEEVW
************************************************************
COL NLIDHKLRTYE
N315 NLIDHKLRTYE
NCTC8325 NLIDHKLRTYE
Newman NLIDHKLRTYE
USA300_FPR3757 NLIDHKLRTYE
***********