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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001124000
- symbol?: tarJ'
- synonym:
- description?: alcohol dehydrogenase
- alcohol dehydrogenase
- alcohol dehydrogenase, zinc-containing
- alcohol dehydrogenase, zinc-containing, putative
- alcohol dehydrogenase catalytic domain-containing protein
- putative alcohol dehydrogenase
- ribitol-5-phosphate dehydrogenase
- zinc-containing alcohol dehydrogenase
- Ribitol-5-phosphate 2-dehydrogenase
- xylitol dehydrogenase
- alcohol dehydrogenase GroES-like domain protein
- pseudogene
- putative ribitol-5-phosphate dehydrogenase (Ribulose-5-P reductase)
- putative zinc-binding dehydrogenase
- zinc-binding dehydrogenase family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1397304..1398357
- synteny block?: BlockID0006440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0252
08BA02176:
C248_0239
11819-97:
MS7_0240
6850:
RSAU_000196
71193:
ST398NM01_0264
ECT-R 2:
ECTR2_213
ED133:
SAOV_0191
ED98:
SAAV_0220
HO 5096 0412:
SAEMRSA15_02110
JH1:
SaurJH1_0243
JH9:
SaurJH9_0237
JKD6008:
SAA6008_00225
JKD6159:
SAA6159_00229
LGA251:
SARLGA251_02160 (tarJ')
M013:
M013TW_0233
MRSA252:
SAR0247
MSHR1132:
SAMSHR1132_02200
MSSA476:
SAS0228
Mu3:
SAHV_0251
Mu50:
SAV0252
MW2:
MW0228
RF122:
SAB0191
ST398:
SAPIG0264
T0131:
SAT0131_00244
TCH60:
HMPREF0772_10251 (tarJ2)
TW20:
SATW20_02540 (tarJ')
USA300_TCH1516:
USA300HOU_0263
VC40:
SAVC_01000
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPM
N315 MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPM
NCTC8325 MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPM
Newman MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPM
USA300_FPR3757 MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPM
************************************************************
COL SLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDY
N315 SLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDY
NCTC8325 SLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDY
Newman SLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDY
USA300_FPR3757 SLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDY
************************************************************
COL VVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPLKTSFGIWGDGNLGYITA
N315 VVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPLKNSFGIWGDGNLGYITA
NCTC8325 VVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPLKTSFGIWGDGNLGYITA
Newman VVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPLKTSFGIWGDGNLGYITA
USA300_FPR3757 VVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPLKTSFGIWGDGNLGYITA
********************************************.***************
COL ILLRKLYPEAKTYVFGKTDYKLSHFSFVDDIFTVNQIPDDLKIDHAFECVGGKGSQVALQ
N315 ILLRKLYPEAKIYVFGKTDYKLSHFSFVDDIFTVNQIPDDLKIDHAFECVGGKGSQVALQ
NCTC8325 ILLRKLYPEAKTYVFGKTDYKLSHFSFVDDIFTVNQIPDDLKIDHAFECVGGKGSQVALQ
Newman ILLRKLYPEAKTYVFGKTDYKLSHFSFVDDIFTVNQIPDDLKIDHAFECVGGKGSQVALQ
USA300_FPR3757 ILLRKLYPEAKTYVFGKTDYKLSHFSFVDDIFTVNQIPDDLKIDHAFECVGGKGSQVALQ
*********** ************************************************
COL QIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDI
N315 QIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDI
NCTC8325 QIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDI
Newman QIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDI
USA300_FPR3757 QIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDI
************************************************************
COL VEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI
N315 VEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI
NCTC8325 VEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI
Newman VEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI
USA300_FPR3757 VEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI
*****************************************