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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001132000
- symbol?: tarF
- synonym:
- description?: CDP-glycerol--glycerophosphate glycerophosphotransferase
- CDP-glycerol--glycerophosphate glycerophosphotransferase
- CDP-glycerol glycerophosphotransferase family protein
- putative teichoic acid biosynthesis protein F
- TagF domain-containing protein
- teichoic acid biosynthesis protein F
- teichoic acid biosynthesis protein F, putative
- CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
- cdp-glycerol:poly(glycerophosphate) glycerophosphotransFerase (polyglycerol phosphate polymerase) (cgptase) (majorteichoic acid biosynthesis protein f)
- CDP-glycerol:poly domain protein
- CDP-glycerol glycerophosphotransferase
- CDP-ribitol:poly(ribitol phosphate) ribitol phosphotransferase
- glycerophosphotransferase, TarF
- Poly(glycerophosphate) glycerophosphotransferase family protein
- TagF domain protein
- trancated TagF
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1401281..1402514
- synteny block?: BlockID0006520
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0254
08BA02176:
C248_0242
11819-97:
MS7_0244
6850:
RSAU_000198 (tagF)
71193:
ST398NM01_0267
ECT-R 2:
ECTR2_215
ED133:
SAOV_0193
ED98:
SAAV_0222
HO 5096 0412:
SAEMRSA15_02130
JH1:
SaurJH1_0245
JH9:
SaurJH9_0239
JKD6008:
SAA6008_00228 (tarF)
JKD6159:
SAA6159_00231 (tarF)
LGA251:
SARLGA251_02180 (tarF)
M013:
M013TW_0235
MRSA252:
SAR0251
MSHR1132:
SAMSHR1132_02220
MSSA476:
SAS0231
Mu3:
SAHV_0253
Mu50:
SAV0254
MW2:
MW0230
RF122:
SAB0193
ST398:
SAPIG0267
T0131:
SAT0131_00247
TCH60:
HMPREF0772_10248 (tagF)
TW20:
SATW20_02560 (tarF)
USA300_TCH1516:
USA300HOU_0265 (tagF)
VC40:
SAVC_01010
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIKNTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPKALYEYLTEHSDAQLI
N315 MIKNTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPKALYEYLTEHSDAQLI
NCTC8325 MIKNTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPKALYEYLTEHSDAQLI
Newman MIKNTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPKALYEYLTEHSDAQLI
USA300_FPR3757 MIKNTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPKALYEYLTEHSDAQLI
************************************************************
COL WGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRTPDWLYKSPRTTYLQTWHG
N315 WGVKKGYEHIFQQYNVPYVTKFSMKWFLAMPRAKAWMINTRTPDWLYKSPRTTYLQTWHG
NCTC8325 WGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRTPDWLYKSPRTTYLQTWHG
Newman WGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRTPDWLYKSPRTTYLQTWHG
USA300_FPR3757 WGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRTPDWLYKSPRTTYLQTWHG
*************:**********************************************
COL TPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPYSTSIFQNAFHVSRDKIL
N315 TPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPYSTSIFQHAFHVSRDKIL
NCTC8325 TPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPYSTSIFQNAFHVSRDKIL
Newman TPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPYSTSIFQNAFHVSRDKIL
USA300_FPR3757 TPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPYSTSIFQNAFHVSRDKIL
*************************************************:**********
COL ETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFD
N315 ETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFD
NCTC8325 ETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFD
Newman ETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFD
USA300_FPR3757 ETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFD
************************************************************
COL IEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYEDISDLYLISDALVTDYSSVM
N315 IEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYEDISDLYLISDALVTDYSSVM
NCTC8325 IEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYEDISDLYLISDALVTDYSSVM
Newman IEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYEDISDLYLISDALVTDYSSVM
USA300_FPR3757 IEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYEDISDLYLISDALVTDYSSVM
************************************************************
COL FDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIVENQTALIDALKQIDETANEY
N315 FDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIVENQTALIDALKQIDETANEY
NCTC8325 FDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIVENQTALIDALKQIDETANEY
Newman FDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIIENQTALIDALKQIDETANEY
USA300_FPR3757 FDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIVENQTALIDALKQIDETANEY
***************************************:********************
COL IEARTVFYQKFCSLEDGQASQRICQTIFK
N315 IEARTVFYQKFCSLEDGQASQRICQTIFK
NCTC8325 IEARTVFYQKFCSLEDGQASQRICQTIFK
Newman IEARTVFYQKFCSLEDGQASQRICQTIFK
USA300_FPR3757 IEARTVFYQKFCSLEDGQASQRICQTIFK
*****************************