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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001166000
- symbol?: —
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- ABC-2 transporter family protein
- ABC-2 type transport system permease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1436882..1437991
- synteny block?: BlockID0006860
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0279
08BA02176:
C248_0269
11819-97:
MS7_0270
6850:
RSAU_000225
71193:
ST398NM01_0294
ECT-R 2:
ECTR2_240
ED133:
SAOV_0220
ED98:
SAAV_0247
HO 5096 0412:
SAEMRSA15_02380
JH1:
SaurJH1_0270
JH9:
SaurJH9_0263
JKD6008:
SAA6008_00253
JKD6159:
SAA6159_00257
LGA251:
SARLGA251_02430
M013:
M013TW_0260
MRSA252:
SAR0276
MSHR1132:
SAMSHR1132_02450
MSSA476:
SAS0255
Mu3:
SAHV_0277
Mu50:
SAV0279
MW2:
MW0255
RF122:
SAB0218c
ST398:
SAPIG0294
T0131:
SAT0131_00274
TCH60:
HMPREF0772_10221
TW20:
SATW20_02810
USA300_TCH1516:
USA300HOU_0292
VC40:
SAVC_01140
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTEDDNHFNIGVVDKDQSSE
N315 MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTEDDNHFNIGVVDKDQSSE
NCTC8325 MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTEDDNHFNIGVVDKDQSSE
Newman MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTEDDNHFNIGVVDKDQSSE
USA300_FPR3757 MKTIHLFRIYHSFLLKKWYLIIYLLFILAALLITLTTIQHVTEDDNHFNIGVVDKDQSSE
************************************************************
COL TKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFVFDKGMTKAFYKQGELPIS
N315 TKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFVFDKGMTKAFYKQGELPIS
NCTC8325 TKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFVFDKGMTKAFYKQGELPIS
Newman TKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFVFDKGMTKAFYKQGELPIS
USA300_FPR3757 TKLILNSIGKGSNLGKNVSIKAYDDKQAHTLLKKHKLQGYFVFDKGMTKAFYKQGELPIS
************************************************************
COL VYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAPKASHSDSINVMTDLLITGLN
N315 VYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAPKASHSDSINVMTDLLITGLN
NCTC8325 VYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAPKASHSDSINVMTDLLITGLN
Newman VYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAPKASHSDSINVMTDLLITGLN
USA300_FPR3757 VYTYDQQSMKSVVLSQLTDSVYQRLMRSMGGILAFQDLAPKASHSDSINVMTDLLITGLN
************************************************************
COL RSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTVLKMNQDTVLKARLKMFHFSKER
N315 RSGAFNLEPIHLYDTGSYYAITGFLATVFIFALSLFTVLKMNQDTVLKARLKMFHFSKER
NCTC8325 RSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTVLKMNQDTVLKARLKMFHFSKER
Newman RSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTVLKMNQDTVLKARLKMFHFSKER
USA300_FPR3757 RSGAFNLEPIHLYDTGSYYAITGFLTTVFIFALSLFTVLKMNQDTVLKARLKMFHFSKER
*************************:**********************************
COL LLIIRTLITWFYTMLWSIVGVVWIVFSIPNIFELYNWPTLAIHLSYYVTFLILWLLLIEL
N315 LLIIRALITWFYTMLWSIVGVVWIVFSIPNTFELYNWPTLAIHLSYYVTFLILWLLLIEL
NCTC8325 LLIIRTLITWFYTMLWSIVGVVWIVFSIPNIFELYNWPTLAIHLSYYVTFLILWLLLIEL
Newman LLIIRTLITWFYTMLWSIVGVVWIVFSIPNIFELYNWPTLAIHLSYYVTFLILWLLLIEL
USA300_FPR3757 LLIIRTLITWFYTMLWSIVGVVWIVFSIPNIFELYNWPTLAIHLSYYVTFLILWLLLIEL
*****:************************ *****************************
COL LTTGLLNSISKVILAIVILVLSGLTIPTIFLQHIANGVFNIQPFAVVTNQLLEIILNNYI
N315 LTTGLLNSISKVILAIVILVLSGLTIPTIFLQHIANGVFNIQPFAVVTNQLLEIILNNYI
NCTC8325 LTTGLLNSISKVILAIVILVLSGLTIPTIFLQHIANGVFNIQPFAVVTNQLLEIILNNYI
Newman LTTGLLNSISKVILAIVILVLSGLTIPTIFLQHIANGVFNIQPFAVVTNQLLEIILNNYI
USA300_FPR3757 LTTGLLNSISKVILAIVILVLSGLTIPTIFLQHIANGVFNIQPFAVVTNQLLEIILNNYI
************************************************************
COL LELHPSFYLSFIALLIINLAVLVWRYRQ
N315 LELHPSFYLSFIALLIINLAVLVWRYRQ
NCTC8325 LELHPSFYLSFIALLIINLAVLVWRYRQ
Newman LELHPSFYLSFIALLIINLAVLVWRYRQ
USA300_FPR3757 LELHPSFYLSFIALLIINLAVLVWRYRQ
****************************