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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001173000
- symbol?: —
- synonym:
- description?: DUF5080 domain-containing protein
- strand?: +
- coordinates?: 1441308..1441808
- synteny block?: BlockID0006920
- occurrence?: in 30% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_0223
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
SAA6159_00261
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_02480
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
SAB0221
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0295
VC40:
SAVC_01150
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIIFILITIFAIYYIAMIASLFKSEGFSIIGLILDVVIMGTLIFYYFIGARFVDHDLSNF
NCTC8325 MIIFILITIFAIYYIAMIASLFKSEGFSIIGLILDVVIMGTLIFYYFIGARFVDHDLSNF
Newman MIIFILITIFAIYYIAMIASLFKSEGFSIIGLILDVVIMGTLIFYYFIGARFVDHDLSNF
USA300_FPR3757 MIIFILITIFAIYYIAMIASLFKSEGFSIIGLILDVVIMGTLIFYYFIGARFVDHDLSNF
************************************************************
COL LMFMDTGSYIFMYFAIKCLWVKPKVVNYLIAKELGESKEVIEEQELDLQTSKIRGIYFFI
NCTC8325 LMFMDTGSYIFMYFAIKCLWVKPKVVNYLIAKELGESKEVIEEQELDLQTSKIRGIYFFI
Newman LMFMDTGSYIFMYFAIKCLWVKPKVVNYLIAKELGESKEVIEEQELDLQTSKIRGIYFFI
USA300_FPR3757 LMFMDTGSYIFMYFAIKCLWVKPKVVNYLIAKELGESKEVIEEQELDLQTSKIRGIYFFI
************************************************************
COL ISVVMLIITKLRMQPELQADAISMNPVFIFVGVIIILIWLVLDIYRKKKYGIFLFKTIVP
NCTC8325 ISVVMLIITKLRMQPELQADAISMNPVFIFVGVIIILIWLVLDIYRKKKYGIFLFKTIVP
Newman ISVVMLIITKLRMQPELQADAISMNPVFIFVGVIIILIWLVLDIYRKKKYGIFLFKTIVP
USA300_FPR3757 ISVVMLIITKLRMQPELQADAISMNPVFIFVGVIIILIWLVLDIYRKKKYGIFLFKTIVP
************************************************************
COL LVVTTWIIIATIILS
NCTC8325 LVVTTWIIIATIILS
Newman LVVTTWIIIATIILS
USA300_FPR3757 LVVTTWIIIATIILS
***************