⊟Summary

• pan ID^?: SAUPAN001179000
• symbol^?: essB
• description^?: protein EssB

  descriptions from strain specific annotations:

  • protein EssB
  • type VII secretion protein EssB
  • Putative secretion system component EssB/YukC
  • virulence protein EssB
  • membrane associated protein
  • putative secretion system component EssB
• strand^?: +
• coordinates^?: 1447360..1448694
• synteny block^?: BlockID0006980
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0275
N315:
SA0275
NCTC8325:
SAOUHSC_00261
Newman:
NWMN_0222
USA300_FPR3757:
SAUSA300_0282
04-02981:
SA2981_0286 (essB)
08BA02176:
C248_0276 (essB)
11819-97:
MS7_0277 (essB)
6850:
RSAU_000232 (essB)
71193:
ST398NM01_0301
ECT-R 2:
ECTR2_247
ED133:
SAOV_0229
ED98:
SAAV_0254
HO 5096 0412:
SAEMRSA15_02450
JH1:
SaurJH1_0277
JH9:
SaurJH9_0270
JKD6008:
SAA6008_00260 (essB)
JKD6159:
SAA6159_00267 (essB)
LGA251:
SARLGA251_02500 (essB)
M013:
M013TW_0267
MRSA252:
SAR0283
MSHR1132:
SAMSHR1132_02540
MSSA476:
SAS0262
Mu3:
SAHV_0284
Mu50:
SAV0286
MW2:
MW0262
RF122:
SAB0227
ST398:
SAPIG0301
T0131:
SAT0131_00282
TCH60:
HMPREF0772_10214 (essB)
TW20:
SATW20_02880 (essB)
USA300_TCH1516:
USA300HOU_0301 (essB)
VC40:
SAVC_01180

⊟Genome Viewer

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFID
  N315            MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFID
  NCTC8325        MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFID
  Newman          MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFID
  USA300_FPR3757  MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFID
                  ************************************************************
  
  COL             AELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDE
  N315            AELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDE
  NCTC8325        AELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDE
  Newman          AELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDE
  USA300_FPR3757  AELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDE
                  ************************************************************
  
  COL             LFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHK
  N315            LFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHK
  NCTC8325        LFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHK
  Newman          LFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHK
  USA300_FPR3757  LFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHK
                  ************************************************************
  
  COL             GTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVL
  N315            GTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVL
  NCTC8325        GTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVL
  Newman          GTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVL
  USA300_FPR3757  GTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVL
                  ************************************************************
  
  COL             LIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQ
  N315            LIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQ
  NCTC8325        LIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQ
  Newman          LIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQ
  USA300_FPR3757  LIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQ
                  ************************************************************
  
  COL             TNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALIN
  N315            TNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALIN
  NCTC8325        TNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALIN
  Newman          TNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALIN
  USA300_FPR3757  TNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALIN
                  ************************************************************
  
  COL             KLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQE
  N315            KLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQE
  NCTC8325        KLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQE
  Newman          KLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQE
  USA300_FPR3757  KLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQE
                  ************************************************************
  
  COL             ENEKKQKEQAQKDKEKRQEAERKK
  N315            ENEKKQKEQAQKDKEKRQEAERKK
  NCTC8325        ENEKKQKEQAQKDKEKRQEAERKK
  Newman          ENEKKQKEQAQKDKEKRQEAERKK
  USA300_FPR3757  ENEKKQKEQAQKDKEKRQEAERKK
                  ************************