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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001198000
- symbol?: —
- synonym:
- description?: TIGR01741 family protein
- TIGR01741 family protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1467982..1468482
- synteny block?: BlockID0007120
- occurrence?: in 30% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
MS7_0288
6850:
RSAU_000242
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_02600
M013:
—
MRSA252:
SAR0295
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
HMPREF0772_10196
TW20:
SATW20_03050
USA300_TCH1516:
USA300HOU_0313
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNFEEKLSEMYNKIANEINEMIPVEWEKVYVIAYVDDGGGQVIFYYTKPRNDELYYYSSI
Newman MNFEEKLSEMYNKIANEINEMIPVEWEKVYVIAYVDDGGGQVIFYYTKPRNDELYYYSSI
USA300_FPR3757 MNFEEKLSEMYNKIANEINEMIPVEWEKVYVIAYVDDGGGQVIFYYTKPRNDELYYYSSI
************************************************************
COL VEDYNVLEEIFDDLWMELYRSFKKLRNIFKEESLEPWTSCEFDFTKEDKLKVSFDYIDWK
Newman VEDYNVLEEIFDDLWMELYRSFKKLRNIFKEESLEPWTSCEFDFTKEDKLKVSFDYIDWK
USA300_FPR3757 VEDYNVLEEIFDDLWMELYRSFKKLRNIFKEESLEPWTSCEFDFTKEDKLKVSFDYIDWK
************************************************************
COL NTEFDQLGQENYYNYRKFGIIPEMEYEMEEVKQIEQYIKEQEEAEQ
Newman NTEFDQLGQENYYNYRKFGIIPEMEYEMEEVKQIEQYIKEQEEAEQ
USA300_FPR3757 NTEFDQLGQENYYNYRKFGIIPEMEYEMEEVKQIEQYIKEQEEAEQ
**********************************************