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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001200000
- symbol?: —
- description?: TIGR01741 family protein
- TIGR01741 family protein
- Repetitive hypothetical protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1470014..1480470
- synteny block?: BlockID0007140
- occurrence?: in 67% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0297
08BA02176:
C248_0285
11819-97:
—
6850:
—
71193:
ST398NM01_0310
ECT-R 2:
ECTR2_258
ED133:
—
ED98:
SAAV_0265
HO 5096 0412:
—
JH1:
SaurJH1_0288
JH9:
SaurJH9_0281
JKD6008:
SAA6008_00270
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR0293
MSHR1132:
—
MSSA476:
SAS0269
Mu3:
SAHV_0295
Mu50:
SAV0298
MW2:
MW0269
RF122:
—
ST398:
SAPIG0310
T0131:
SAT0131_00294 (tgt)
TCH60:
HMPREF0772_10204
TW20:
SATW20_02980
USA300_TCH1516:
USA300HOU_0312
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL chromosome | |
| N315 chromosome | |
| Newman chromosome | |
| USA300_FPR3757 chromosome |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTFEEKLSEMYSEIANKISSMIPVEWEKVYAMAYIDDGGGEVFYYYTEPGSNELYYYTSV
N315 MTFEEKLSQMYNEIANKISSMIPVEWEKVYTMAYIDDEGGEVFYYYTEPGSNELYYYTSV
Newman MTFEEKLSEMYSEIANKISSMIPVEWEKVYAMAYIDDGGGEVFYYYTEPGSNELYYYTSV
USA300_FPR3757 MTFEEKLSEMYSEIANKISSMIPVEWEKVYAMAYIDDGGGEVFYYYTEPGSNELYYYTSV
********:**.******************:****** **********************
COL LNKYDISESEFMDSVYELYKQFQNLRNLFKEEGHEPWTSCEFDFTREGELKVSFDYIDWI
N315 LNKYDISESEFMDSAYELYKQFQNLRNIFKEEGYEPWTSCEFDFTKEGELKVSFDYIDWI
Newman LNKYDISESEFMDSVYELYKQFQNLRNLFKEEGHEPWTSCEFDFTREGELKVSFDYIDWI
USA300_FPR3757 LNKYDISESEFMDSVYELYKQFQNLRNLFKEEGHEPWTSCEFDFTREGELKVSFDYIDWI
**************.************:*****:***********:**************
COL NSEFGQVGRQNYYKYRKFGILPETEYEINKVKEIEQYVKEQEEAEQ
N315 NTEFDQLGRQNYYMYKKFGVIPEMEYEMEEVKEIEQYIKEQEEAEQ
Newman NSEFGQVGRQNYYKYRKFGILPETEYEINKVKEIEQYVKEQEEAEQ
USA300_FPR3757 NSEFGQVGRQNYYKYRKFGILPETEYEINKVKEIEQYVKEQEEAEQ
*:**.*:****** *:***::** ***:::*******:********