Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001207000
- symbol?: —
- synonym:
- description?: TIGR01741 family protein
- TIGR01741 family protein
- pseudogene
- Repetitive hypothetical protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1479926..1488052
- synteny block?: BlockID0007190
- occurrence?: in 52% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0298
08BA02176:
—
11819-97:
—
6850:
RSAU_000243
71193:
—
ECT-R 2:
ECTR2_259
ED133:
—
ED98:
SAAV_0266
HO 5096 0412:
—
JH1:
SaurJH1_0289
JH9:
SaurJH9_0282
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS0274
Mu3:
SAHV_0296
Mu50:
SAV0299
MW2:
MW0274
RF122:
SAB0238
ST398:
—
T0131:
—
TCH60:
HMPREF0772_10203
TW20:
—
USA300_TCH1516:
USA300HOU_0314
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MTFEEKISKLYNEIANEISSMIPVEWEKVYTMAYIDDGGGEVFFNYTKPGSDDLNYYTDI
Newman -----------------------------------------MKYSLIILNSDELNYYTDI
USA300_FPR3757 ME--------------------------------------EVKYSLIILNSDELNYYTDI
: :. .**:*******
N315 PKEYNISVQVFDDLWMDLYDLFEELRDLFKEEDLEPWTSCEFDFTSEGKLKVSLDYIDWI
Newman PKEYNISVQVFDDLWMDLYDLFEELRNLFKEEGLEPWTSCEFDFTREGKLKVSFDYIDWI
USA300_FPR3757 PKEYNISVQVFDDLWMDLYDLFEELRNLFKEEGLEPWTSCEFDFTREGKLKVSFDYIDWI
**************************:*****.************ *******:******
N315 NTEFDQLGRENYYMYKKFGVIPEMEYEMEEIKEIEQYIKEQDEAEL
Newman NSEFGQVGRQNYYKYRKFGILPETEYEINKVKEIEQYIKEQEEAEL
USA300_FPR3757 NSEFGQVGRQNYYKYRKFGILPETEYEINKVKEIEQYIKEQDEAEL
*:**.*:**:*** *:***::** ***::::**********:****