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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001221000
- symbol?: —
- synonym:
- description?: cystatin-like fold lipoprotein
- cystatin-like fold lipoprotein
- DUF4467 domain-containing protein
- putative lipoprotein
- lipoprotein, putative
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1509460..1509868
- synteny block?: BlockID0007320
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0302
08BA02176:
C248_0291
11819-97:
MS7_0293
6850:
RSAU_000249
71193:
ST398NM01_0316
ECT-R 2:
ECTR2_263
ED133:
SAOV_0255
ED98:
SAAV_0270
HO 5096 0412:
SAEMRSA15_02590
JH1:
SaurJH1_0293
JH9:
SaurJH9_0286
JKD6008:
SAA6008_00278
JKD6159:
SAA6159_00278
LGA251:
SARLGA251_02650
M013:
M013TW_0284
MRSA252:
SAR0299
MSHR1132:
SAMSHR1132_02770
MSSA476:
SAS0280
Mu3:
SAHV_0300
Mu50:
SAV0303
MW2:
MW0280
RF122:
SAB0240
ST398:
SAPIG0316
T0131:
SAT0131_00302
TCH60:
HMPREF0772_10193
TW20:
SATW20_03080
USA300_TCH1516:
USA300HOU_0322
VC40:
SAVC_01265
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDSN
N315 MKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDSN
NCTC8325 MKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDSN
Newman MKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDSN
USA300_FPR3757 MKRILVVFLMLAIILAGCSNKGEKYQKDIDKVYKEQNQMNKIASKVQNTIKTDIKQEDSN
************************************************************
COL THVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREIDPIKYMKDHKADYEDENVE
N315 THVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREIDPIKYMKDHKADYEDENVE
NCTC8325 THVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREIDPIKYMKDHKADYEDENVE
Newman THVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREIDPIKYMKDHKADYEDENVE
USA300_FPR3757 THVYKDGKVIVIGIQLYKDREKMYYFAYEIKDGKAEINREIDPIKYMKDHKADYEDENVE
************************************************************
COL VEKD
N315 VEKD
NCTC8325 VEKD
Newman VEKD
USA300_FPR3757 VEKD
****