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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001230000
- symbol?: —
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- peptide ABC transporter permease
- ABC transporter, permease protein
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter ATP-binding protein
- ABC transporter permease protein
- ftsX-like permease family protein
- permease family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1515810..1516859
- synteny block?: BlockID0007410
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0307
08BA02176:
C248_0296
11819-97:
MS7_0298
6850:
RSAU_000254
71193:
ST398NM01_0321
ECT-R 2:
ECTR2_268
ED133:
SAOV_0261
ED98:
SAAV_0275
HO 5096 0412:
SAEMRSA15_02640
JH1:
SaurJH1_0298
JH9:
SaurJH9_0291
JKD6008:
SAA6008_00284
JKD6159:
SAA6159_00284
LGA251:
SARLGA251_02700
M013:
M013TW_0289
MRSA252:
SAR0305
MSHR1132:
SAMSHR1132_02820
MSSA476:
SAS0285
Mu3:
SAHV_0305
Mu50:
SAV0308
MW2:
MW0285
RF122:
SAB0245
ST398:
SAPIG0321
T0131:
SAT0131_00311
TCH60:
HMPREF0772_10187
TW20:
SATW20_03130
USA300_TCH1516:
USA300HOU_0328
VC40:
SAVC_01290
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
N315 MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
NCTC8325 MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
Newman MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
USA300_FPR3757 MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
************************************************************
COL ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
N315 ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
NCTC8325 ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
Newman ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
USA300_FPR3757 ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
************************************************************
COL KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASSVIFTNDATIAK
N315 KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASPVIFTNDATIAK
NCTC8325 KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASSVIFTNDATIAK
Newman KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASSVIFTNDATIAK
USA300_FPR3757 KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASSVIFTNDATIAK
************************************************.***********
COL INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
N315 INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
NCTC8325 INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
Newman INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
USA300_FPR3757 INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
************************************************************
COL ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTVILALFGTAFGLLLTGVT
N315 ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTLILALFGTAFGLLLTGVT
NCTC8325 ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTVILALFGTAFGLLLTGVT
Newman ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTVILALFGTAFGLLLTGVT
USA300_FPR3757 ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTVILALFGTAFGLLLTGVT
******************************************:*****************
COL GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
N315 GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
NCTC8325 GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
Newman GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
USA300_FPR3757 GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
*************************************************