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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001233000
- symbol?: —
- synonym:
- description?: PTS sugar transporter subunit IIC
- PTS sugar transporter subunit IIC
- perfringolysin O regulator protein
- phosphotransferase system IIC component-like protein
- transcriptional regulator
- Perfringolysin O regulator protein PfoR
- perfringolysin O regulatory protein
- PfoR family transcriptional regulator
- phosphotransferase system fructose-specific IIC component-like protein
- Regulatory protein
- regulatory protein PfoR
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1517751..1518788
- synteny block?: BlockID0007440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0309 (pfoR)
08BA02176:
C248_0299 (pfoR)
11819-97:
MS7_0300
6850:
RSAU_000256
71193:
ST398NM01_0323
ECT-R 2:
ECTR2_270
ED133:
SAOV_0263
ED98:
SAAV_0277 (pfoR)
HO 5096 0412:
SAEMRSA15_02660
JH1:
SaurJH1_0300
JH9:
SaurJH9_0293
JKD6008:
SAA6008_00286
JKD6159:
SAA6159_00286
LGA251:
SARLGA251_02720
M013:
M013TW_0291
MRSA252:
SAR0307
MSHR1132:
SAMSHR1132_02840
MSSA476:
SAS0287
Mu3:
SAHV_0307
Mu50:
SAV0310
MW2:
MW0287
RF122:
SAB0247
ST398:
SAPIG0323
T0131:
SAT0131_00314
TCH60:
HMPREF0772_10185 (pfoR)
TW20:
SATW20_03150
USA300_TCH1516:
USA300HOU_0330
VC40:
SAVC_01300
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLVEAFNKYVGGEVFGI
N315 --MDLMIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLVEAFNKYVGGEVFGI
NCTC8325 -----------------------------MRAMGALANAAIATFLVEAFNKYVGGEVFGI
Newman MVMDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLVEAFNKYVGGEVFGI
USA300_FPR3757 --MDLLIGTLFLFLVLVIFTLFTYKAPNGMRAMGALANAAIATFLVEAFNKYVGGEVFGI
*******************************
COL KFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMDLLPGFFAGYMIGYVMK
N315 KFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMDLLPGFFAGYMIGYVMK
NCTC8325 KFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMDLLPGFFAGYMIGYVMK
Newman KFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMDLLPGFFAGYMIGYVMK
USA300_FPR3757 KFLEELGDAAGGLGGVAAAGLTALAIGVSPVYALVIAAACGGMDLLPGFFAGYMIGYVMK
************************************************************
COL YTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIGDIIQSSTNTNPIIMGIIL
N315 YTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIGDIIQSSTNTNPIIMGIIL
NCTC8325 YTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIGDIIQSSTNTNPIIMGIIL
Newman YTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIGDIIQSSTNTNPIIMGIIL
USA300_FPR3757 YTEKYVPDGVDLIGSIVILAPLARLIAVLLTPVVNSTLIRIGDIIQSSTNTNPIIMGIIL
************************************************************
COL GGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTIAV
N315 GGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTIAV
NCTC8325 GGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTIAV
Newman GGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTIAV
USA300_FPR3757 GGIITVVGTAPLSSMALTALLGLTGVPMAIGAMAAFSSAFMNGTLFHRLKLGDRKSTIAV
************************************************************
COL SIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGLINDATGTATPIAGFLVMFGFNH
N315 SIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGLINDATGTATPIAGFLVMFGFNH
NCTC8325 SIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGLINDATGTATPIAGFLVMFGFNH
Newman SIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGLINDATGTATPIAGFLVMFGFNH
USA300_FPR3757 SIEPLSQADIVSANPIPIYITNFFGGAIAGLIIAMSGLINDATGTATPIAGFLVMFGFNH
************************************************************
COL PTTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQDMINRGAVDA
N315 PMTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQDMINRGAVDA
NCTC8325 PTTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQDMINRGAVDA
Newman PTTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQDMINRGAVDA
USA300_FPR3757 PTTIVIYGVVMAIVGALAGYLGSIVFKKYPIVTKQDMINRGAVDA
* *******************************************