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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001245000
- symbol?: gehB
- synonym:
- description?: lipase
- lipase
- glycerol ester hydrolase
- lipase 2
- lipase precursor, interruption-N
- triacylglycerol lipase
- truncated triacylglycerol lipase precursor
- YSIRK domain-containing triacylglycerol lipase Lip2/Geh
- lipase, glycerol ester hydrolase
- lipase 2 (Glycerol ester hydrolase 2)
- lipase 2 precursor
- Lipase precursor
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1531365..1533310
- synteny block?: BlockID0007560
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0319 (geh)
08BA02176:
C248_0309 (geh)
11819-97:
MS7_0310 (lip2)
6850:
RSAU_000266 (geh)
71193:
ST398NM01_0333
ECT-R 2:
ECTR2_280
ED133:
SAOV_0273
ED98:
SAAV_0287
HO 5096 0412:
SAEMRSA15_02760 (geh)
JH1:
SaurJH1_0310
JH9:
SaurJH9_0303
JKD6008:
SAA6008_00297
JKD6159:
SAA6159_00296
LGA251:
SARLGA251_02820 (geh)
M013:
M013TW_0301
MRSA252:
SAR0317 (geh)
MSHR1132:
SAMSHR1132_02940
MSSA476:
SAS0297
Mu3:
SAHV_0317 (geh)
Mu50:
SAV0320 (geh)
MW2:
MW0297 (geh)
RF122:
SAB0257 (geh)
ST398:
SAPIG0333
T0131:
SAT0131_00325
TCH60:
HMPREF0772_10175 (geh)
TW20:
—
USA300_TCH1516:
USA300HOU_0340 (lip1)
VC40:
SAVC_01350 (geh)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
N315 MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTPTSNAAAQKETLNQPGEQG
NCTC8325 MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
Newman MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
USA300_FPR3757 MLRGQEERKYSIRKYSIGVVSVLAATMFVVSSHEAQASEKTST-NAAAQKETLNQPGEQG
*****************************************.* ****************
COL NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
N315 NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
NCTC8325 NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
Newman NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRTQNDNQVKQDS
USA300_FPR3757 NAITSHQMQSGKQLDDMHKENGKSGTVTEGKDTLQSSKHQSTQNSKTIRMQNDNQVKQDS
************************************************* **********
COL ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
N315 ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVLPN
NCTC8325 ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
Newman ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
USA300_FPR3757 ERQGSKQSHQNNATNNTERQNDQVQNTHHAERNGSQSTTSQSNDVDKSQPSIPAQKVIPN
*********************************************************:**
COL HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
N315 HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
NCTC8325 HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
Newman HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
USA300_FPR3757 HDKAAPTSTTPPSNDKTAPKSTKAQDATTDKHPNQQDTHQPAHQIIDAKQDDTVRQSEQK
************************************************************
COL PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
N315 PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
NCTC8325 PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
Newman PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
USA300_FPR3757 PQVGDLSKHIDGQNSPEKPTDKNTDNKQLIKDALQAPKTRSTTNAAADAKKVRPLKANQV
************************************************************
COL QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
N315 QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
NCTC8325 QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
Newman QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
USA300_FPR3757 QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNY
************************************************************
COL DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
N315 DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
NCTC8325 DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
Newman DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
USA300_FPR3757 DRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIR
************************************************************
COL LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
N315 LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
NCTC8325 LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
Newman LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
USA300_FPR3757 LMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASITTLATPHNGSQAADKFGNTEA
************************************************************
COL VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
N315 VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
NCTC8325 VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
Newman VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
USA300_FPR3757 VRKIMFALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLT
************************************************************
COL LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
N315 LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMDTTSRIIGHDAREEW
NCTC8325 LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
Newman LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
USA300_FPR3757 LDGSAKLNNMTSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMATTSRIIGHDAREEW
********************************************* **************
COL RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWD---------------
N315 RKNDGVVPVISSLHPSNQPFINVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRK
NCTC8325 RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRK
Newman RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWD---------------
USA300_FPR3757 RKNDGVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRK
********************:************************
COL -------------------------------
N315 GAELANFYTGIINDLLRVEATESKGTQLKAS
NCTC8325 GAELANFYTGIINDLLRVEATESKGTQLKAS
Newman -------------------------------
USA300_FPR3757 GAELANFYTGIINDLLRVEATESKGTQLKAS