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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001446000
- symbol?: —
- synonym:
- description?: bacteriophage L54a DnaB-like helicase family protein
- bacteriophage L54a DnaB-like helicase family protein
- DNA damage-inducible protein
- prophage L54a, replicative DNA helicase
- bacteriophage L54a, DnaB-like helicase family protein
- Replicative DnaB-like helicase family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1714898..1716139
- synteny block?: BlockID0009240
- occurrence?: in 12% of 34 strains
⊟Additional information (user-provided)[edit | edit source]
⊟Orthologs[edit | edit source]
Newman:
—
USA300_FPR3757:
—
JSNZ:
—
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_1083
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_01876
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
—
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
COL MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKA
NCTC8325 MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKA
************************************************************
COL TKDKEFLDADTITKLYNSDFIGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNN
NCTC8325 TKDKEFLDADTITKLYNSDFIGYGFFERYQQELLESYQLNKANELVTEFKQQPTNQNFNN
************************************************************
COL LIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIKTGYKLMDYKIGGLEPSQLIV
NCTC8325 LIDELKDLKTITNKKEDGTKKFVEEFVEELYSDSPKKQIKTGYKLMDYKIGGLEPSQLIV
************************************************************
COL IAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
NCTC8325 IAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRN
************************************************************
COL LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDGQQVIFIDYLQLMDTDA
NCTC8325 LTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDRQQVIFIDYLQLMDTDA
******************************************* ****************
COL KVDRRVAVEKISRDLKIIANETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADAS
NCTC8325 KVDRRVAVEKISRDLKIIANETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADAS
************************************************************
COL LAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGIIEFEYYKKTQRFFT
NCTC8325 LAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGIIEFEYYKKTQRFFT
*****************************************************