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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN001825000
  • symbol?:
  • synonym:
  • description?: tail protein

      descriptions from strain specific annotations:

    • tail protein
    • bacteriophage L54aIg-like domain-containing protein
    • phiSLT ORF151-like protein, major tail protein
    • prophage L54a, major tail protein
    • bacterial Ig-like domain family protein
    • Ig domain-containing protein
    • major tail protein
    • phage major tail protein
  • strand?: -
  • coordinates?: 2271752..2272207
  • synteny block?: BlockID0012010
  • occurrence?: in 44% of 34 strains

mtpS : serogroup A prophage major tail tube protein small subunit [1]

Most staphylococcal prophages require two major tail tube proteins to form orderly coiled polymers around the tail tape measure protein. After nucleation at the distal baseplate, MtpS monomers polymerize, spiraling their way up the tail tape measure protein, displacing tail assembly chaperones and incorporating MtpL monomers as necessary to maintain proper tight spirals. Upon reaching the end of the tape measure protein, the final MtpS spiral is stabilized by a ring of tail-completion/"neck" proteins resulting in a tail tube that is structurally-secure and competent for binding to phage capsids.

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    08BA02176:
    C248_0358
    11819-97:
    MS7_1459
    6850:
    71193:
    ECT-R 2:
    ED133:
    ED98:
    SAAV_2023
    HO 5096 0412:
    SAEMRSA15_13650
    JH1:
    SaurJH1_1088
    JH9:
    SaurJH9_1068
    JKD6008:
    JKD6159:
    JSNZ:
    LGA251:
    M013:
    MRSA252:
    SAR1510
    MSHR1132:
    MSSA476:
    SAS0941
    Mu3:
    Mu50:
    MW2:
    MW1392
    RF122:
    ST398:
    SAPIG0382
    T0131:
    TCH60:
    HMPREF0772_11699
    TW20:
    USA300_TCH1516:
    USA300HOU_1444
    VC40:

Genome Viewer[edit | edit source]

COL
NCTC8325
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKVDVPQF
    NCTC8325        MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKVDVPQF
    USA300_FPR3757  MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKVDVPQF
                    ************************************************************

    COL             KTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKILKYTSEHPEFVTVDENTGAI
    NCTC8325        KTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKILKYTSEHPEFVTVDENTGAI
    USA300_FPR3757  KTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKILKYTSEHPEFVTVDENTGAI
                    ************************************************************

    COL             HGVAEGTSVITAMSTDGSDKSGQISVTVTNG
    NCTC8325        HGVAEGTSVITATSTDGSDKSGQISVTVTNG
    USA300_FPR3757  HGVAEGTSVITAMSTDGSDKSGQISVTVTNG
                    ************ ******************

  1. Jun Xu, Roger W Hendrix, Robert L Duda
    Conserved translational frameshift in dsDNA bacteriophage tail assembly genes.
    Mol Cell: 2004, 16(1);11-21
    [PubMed:15469818] [WorldCat.org] [DOI] (P p)
    Isabelle Auzat, Anja Dröge, Frank Weise, Rudi Lurz, Paulo Tavares
    Origin and function of the two major tail proteins of bacteriophage SPP1.
    Mol Microbiol: 2008, 70(3);557-69
    [PubMed:18786146] [WorldCat.org] [DOI] (I p)