PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001829000
• symbol^?: —
• synonym:
• description^?: phiSLT ORF110-like protein

  descriptions from strain specific annotations:

  • phiSLT ORF110-like protein
  • SLT orf 110-like protein
  • phage protein
• strand^?: -
• coordinates^?: 2275447..2275779
• synteny block^?: BlockID0012050
• occurrence^?: in 45% of 33 strains

⊟Orthologs

COL:
SACOL0372
N315:
—
NCTC8325:
SAOUHSC_01532
Newman:
—
USA300_FPR3757:
SAUSA300_1399
04-02981:
—
08BA02176:
C248_0354
11819-97:
MS7_1463
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
SAAV_2027
HO 5096 0412:
SAEMRSA15_13690
JH1:
SaurJH1_1084
JH9:
SaurJH9_1064
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR1514
MSHR1132:
—
MSSA476:
SAS0937
Mu3:
—
Mu50:
—
MW2:
MW1396
RF122:
—
ST398:
SAPIG0378
T0131:
—
TCH60:
HMPREF0772_11695
TW20:
—
USA300_TCH1516:
USA300HOU_1448
VC40:
—

⊟Genome Viewer

COL
NCTC8325
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MEFNEFKDRAYFFQYINKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTII
  NCTC8325        MEFNEFKDRAYFFQYINKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTII
  USA300_FPR3757  MEFNEFKDRAYFFQYINKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTII
                  ************************************************************
  
  COL             VRSSKTEYLPQTNHLVKIDSALYSDKLFNIVEIRIDTPDIGYNTVVLSEK
  NCTC8325        VRSSKTEYLPQTNHLVKIDSALYSDKLFNIVEIRIDTPDIGYNTVVLSEK
  USA300_FPR3757  VRSSKTEYLPQTNHLVKIDSALYSDKLFNIVEIRIDTPDIGYNTVVLSEK
                  **************************************************