PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001851000
• symbol^?: —
• synonym:
• description^?: alpha/beta hydrolase

  descriptions from strain specific annotations:

  • alpha/beta hydrolase
  • hypothetical protein with Aes esterase/lipase domain
  • alpha/beta family hydrolase
  • acetyl esterase
  • esterase/lipase-like protein
• strand^?: -
• coordinates^?: 2351234..2352061
• synteny block^?: BlockID0012260
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0391
N315:
SA0310
NCTC8325:
SAOUHSC_00301
Newman:
NWMN_0314
USA300_FPR3757:
SAUSA300_0321
04-02981:
SA2981_0320
08BA02176:
C248_0372
11819-97:
MS7_0311
6850:
RSAU_000267
71193:
ST398NM01_0401
ECT-R 2:
ECTR2_281
ED133:
SAOV_0346c
ED98:
SAAV_0288
HO 5096 0412:
SAEMRSA15_02770
JH1:
SaurJH1_0380
JH9:
SaurJH9_0369
JKD6008:
SAA6008_00298
JKD6159:
SAA6159_00297
LGA251:
SARLGA251_02830
M013:
M013TW_0302
MRSA252:
SAR0318
MSHR1132:
SAMSHR1132_02950
MSSA476:
SAS0298
Mu3:
SAHV_0318
Mu50:
SAV0321
MW2:
MW0298
RF122:
SAB0271c
ST398:
SAPIG0401
T0131:
SAT0131_00326 (sbnA)
TCH60:
HMPREF0772_10174
TW20:
SATW20_03890
USA300_TCH1516:
USA300HOU_0341
VC40:
SAVC_01355

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTEIKDKVITKDAFALPYTIIKAKNQPTKGAIVYIHGGGLMFGKANDLSPQYIDILTEHY
  N315            MTEIKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHY
  NCTC8325        MTEIKDKVITKDAFALPYTIIKAKNQPTKGAIVYIHGGGLMFGKANDLSPQYIDILTEHY
  Newman          MTEIKDKVITKDAFALPYTIIKAKNQPTKGAIVYIHGGGLMFGKANDLSPQYIDILTEHY
  USA300_FPR3757  MTEIKDKVITKDAFALPYTIIKAKNQPTKGAIVYIHGGGLMFGKANDLSPQYIDILTEHY
                  ***** ************************.*****************************
  
  COL             DLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDID
  N315            DLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDID
  NCTC8325        DLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDID
  Newman          DLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDID
  USA300_FPR3757  DLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARDRDID
                  ************************************************************
  
  COL             GVIDFYGYSRINTEPFKTTNSYYAKIAQSVNETMIAQLTSPTPVVQDQIAQRFLIYVYAR
  N315            GVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYAR
  NCTC8325        GVIDFYGYSRINTEPFKTTNSYYAKIAQSVNETMIAQLTSPTPVVQDQIAQRFLIYVYAR
  Newman          GVIDFYGYSRINTEPFKTTNSYYAKIAQSVNETMIAQLTSPTPVVQDQIAQRFLIYVYAR
  USA300_FPR3757  GVIDFYGYSRINTEPFKTTNSYYAKIAQSVNETMIAQLTSPTPVVQDQIAQRFLIYVYAR
                  *****************************:******************************
  
  COL             GTGKWINMINIADYTNSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTF
  N315            GTGKWINMINIADYTDSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTF
  NCTC8325        GTGKWINMINIADYTNSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTF
  Newman          GTGKWINMINIADYTNSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTF
  USA300_FPR3757  GTGKWINMINIADYTNSKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTF
                  ***************:********************************************
  
  COL             ERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMM
  N315            ERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMV
  NCTC8325        ERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMM
  Newman          ERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMM
  USA300_FPR3757  ERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITMM
                  **********************************: