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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001870000
- symbol?: mepB
- synonym:
- description?: MATE family multidrug efflux pump protein
- MATE family multidrug efflux pump protein
- mepB family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2365528..2365944
- synteny block?: BlockID0012440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0334
08BA02176:
C248_0390
11819-97:
MS7_0325
6850:
RSAU_000281
71193:
ST398NM01_0416
ECT-R 2:
ECTR2_295
ED133:
SAOV_0360
ED98:
SAAV_0303
HO 5096 0412:
SAEMRSA15_02910
JH1:
SaurJH1_0394
JH9:
SaurJH9_0384
JKD6008:
SAA6008_00312 (mepB)
JKD6159:
SAA6159_00310 (mepB)
LGA251:
SARLGA251_02960 (mepB)
M013:
M013TW_0315
MRSA252:
SAR0332
MSHR1132:
SAMSHR1132_03090
MSSA476:
SAS0312
Mu3:
SAHV_0332
Mu50:
SAV0335
MW2:
MW0312
RF122:
SAB0285
ST398:
SAPIG0416
T0131:
SAT0131_00340 (hemB)
TCH60:
HMPREF0772_10160
TW20:
SATW20_04030 (mepB)
USA300_TCH1516:
USA300HOU_0356
VC40:
SAVC_01425
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MCKSKILLKNIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQSRLAKKTPTKSGYFVTC
N315 MYKSKILLKYIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQSRLAKKTPTKAGYFVTC
NCTC8325 MCKSKILLKNIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQSRLAKKTPTKSGYFVTC
Newman MCKSKILLKNIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQSRLAKKTPTKSGYFVTC
USA300_FPR3757 MCKSKILLKNIFSEESEVKDLTEEKYNQDYEALTFSFKEETYQSRLAKKTPTKSGYFVTC
* ******* *******************************************:******
COL WTKDEDNYNRPYKIEEFADYLIVAVIDDELNGYFLFPRELLVEKGILASSKYQGKMAFRV
N315 WTKDENNCNQPYSKEAFADYLMIIVIDEELSGYFLFPRELLVEKGILTTFEHKGKMAFRV
NCTC8325 WTKDEDNYNRPYKIEEFADYLIVAVIDDELNGYFLFPRELLVEKGILASSKYQGKMAFRV
Newman WTKDEDNYNRPYKIEEFADYLIVAVIDDELNGYFLFPRELLVEKGILASSKYQGKMAFRV
USA300_FPR3757 WTKDEDNYNRPYKIEEFADYLIVAVIDDELNGYFLFPRELLVEKGILASSKYQGKMAFRV
*****:* *:**. * *****:: ***:**.****************:: :::*******
COL YPKWCNQLNKTAGQTQKWQCKYFFEY------
N315 YPKWCNQLNKTAGQTQKWQCKYFLNTNKKSYG
NCTC8325 YPKWCNQLNKTAGQTQKWQCKYFFEY------
Newman YPKWCNQLNKTAGQTQKWQCKYFFEY------
USA300_FPR3757 YPKWCNQLNKTAGQTQKWQCKYFFEY------
***********************::