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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001882000
- symbol?: fepA
- synonym:
- description?: EfeM/EfeO family lipoprotein
- EfeM/EfeO family lipoprotein
- iron-binding lipoprotein
- lipoprotein
- putative lipoprotein
- Ferrous iron transport periplasmic protein EfeO
- imelysin family protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2372842..2373696
- synteny block?: BlockID0012560
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0341 (efeO)
08BA02176:
C248_0398
11819-97:
MS7_0333
6850:
RSAU_000288 (fepA)
71193:
ST398NM01_0424
ECT-R 2:
ECTR2_303
ED133:
SAOV_0367
ED98:
SAAV_0311
HO 5096 0412:
SAEMRSA15_02980
JH1:
SaurJH1_0401
JH9:
SaurJH9_0391
JKD6008:
SAA6008_00320
JKD6159:
SAA6159_00317
LGA251:
SARLGA251_03030
M013:
M013TW_0322
MRSA252:
SAR0340
MSHR1132:
SAMSHR1132_03160
MSSA476:
SAS0319
Mu3:
SAHV_0340
Mu50:
SAV0343
MW2:
MW0319
RF122:
SAB0293
ST398:
SAPIG0424
T0131:
SAT0131_00348 (clpX)
TCH60:
HMPREF0772_10151
TW20:
SATW20_04110
USA300_TCH1516:
USA300HOU_0364
VC40:
SAVC_01465
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQATKAYDKYTDEQLNEFL
N315 MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQATKAYDKYTDEQLNEFL
NCTC8325 MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQATKAYDKYTDEQLNEFL
Newman MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQATKAYDKYTDEQLNEFL
USA300_FPR3757 MKKLTTLLLASTLLIAACGNDDSKKDDSKTSKKDDGVKAELKQATKAYDKYTDEQLNEFL
************************************************************
COL KGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEK
N315 KGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEK
NCTC8325 KGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEK
Newman KGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEK
USA300_FPR3757 KGTEKFVKAIENNDMAQAKALYPKVRMYYERSEPVAEAFGDLDPKIDARLADMKEEKKEK
************************************************************
COL EWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKADTLDITPKLMLQGSVDLLNE
N315 EWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKADTLDITPKLMLQGSVDLLNE
NCTC8325 EWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKADTLDITPKLMLQGSVDLLNE
Newman EWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKADTLDITPKLMLQGSVDLLNE
USA300_FPR3757 EWSGYHKIEKALYEDKKIDDVTKKDAQQLLKDAKELHAKADTLDIIPKLMLQGSVDLLNE
********************************************* **************
COL VATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPILEKKDKKLSDDIQMNFDKVNQL
N315 VATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPILEKKDKKLSDDIQMNFDKVNQL
NCTC8325 VATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPILEKKDKKLSDDIQMNFDKVNQL
Newman VATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPILEKKDKKLSDDIQMNFDKVNQL
USA300_FPR3757 VATSKITGEEEIYSHTDLYDFKANVEGAQKIYDLFKPILEKKDKKLSDDIQMNFDKVNQL
************************************************************
COL LDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPLSKMAVITE
N315 LDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPLSKMAVITE
NCTC8325 LDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPLSKMAVITE
Newman LDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPLSKMAVITE
USA300_FPR3757 LDKYKDNNGGYESFEKVSKKDRKAFADAVNALGEPLSKMAVITE
********************************************