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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001899000
- symbol?: mdh
- synonym:
- description?: metal-dependent hydrolase
- metal-dependent hydrolase
- cyclase, putative
- cyclase family protein
- Metal-dependent hydrolase/cyclase
- Polyketide cyclase family protein
- putative cyclase enzyme
- putative cyclase protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2386387..2387139
- synteny block?: BlockID0012720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0353
08BA02176:
C248_0411
11819-97:
MS7_0345
6850:
RSAU_000300
71193:
ST398NM01_0435
ECT-R 2:
ECTR2_316
ED133:
SAOV_0379c
ED98:
SAAV_0323
HO 5096 0412:
SAEMRSA15_03100
JH1:
SaurJH1_0413
JH9:
SaurJH9_0403
JKD6008:
SAA6008_00332
JKD6159:
SAA6159_00329
LGA251:
SARLGA251_03170
M013:
M013TW_0334
MRSA252:
SAR0352
MSHR1132:
SAMSHR1132_03280
MSSA476:
SAS0331
Mu3:
SAHV_0352
Mu50:
SAV0355
MW2:
MW0331
RF122:
SAB0305c
ST398:
SAPIG0435
T0131:
SAT0131_00362
TCH60:
HMPREF0772_10139
TW20:
SATW20_04230
USA300_TCH1516:
USA300HOU_0376
VC40:
SAVC_01525
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLFTVKDHGFYVQRWNIVT
N315 MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLFTVKDHGFYVQRWNIVT
NCTC8325 MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLFTVKDHGFYVQRWNIVT
Newman MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLFTVKDHGFYVQRWNIVT
USA300_FPR3757 MTQYPLWQQLNTLKQATWVDLTHTFDPEIPRFSEFEKGEVSTLFTVKDHGFYVQRWNIVT
************************************************************
COL QYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVANNNDFIVTRAHIEAWEKEH
N315 QYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVANNNDFIVTRAHIEAWEKEH
NCTC8325 QYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVANNNDFIVTRAHIEAWEKEH
Newman QYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVANNNDFIVTRAHIEAWEKEH
USA300_FPR3757 QYGTHIDAPIHFVENKRYLEDIDLKELVLPLIVLDFSTEVANNNDFIVTRAHIEAWEKEH
************************************************************
COL GTIEPGTFVALRTDWSKRWPNIEKFENKDANGQQHAPGWGLDALKYLIEERRVEAVGHET
N315 GTIEPGTFVALRTDWSKRWPNIEKFENKDANGQQHAPGWGLDALKYLIEERRVEAVGHET
NCTC8325 GTIEPGTFVALRTDWSKRWPNIEKFENKDANGQQHAPGWGLDALKYLIEERRVEAVGHET
Newman GTIEPGTFVALRTDWSKRWPNIEKFENKDANGQQHAPGWGLDALKYLIEERRVEAVGHET
USA300_FPR3757 GTIEPGTFVALRTDWSKRWPNIEKFENKDANGQQHAPGWGLDALKYLIEERRVEAVGHET
************************************************************
COL FDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQLPTRGAIIYAISPKPKDAPGFPV
N315 FDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQLPTRGAIIYAISPKPKDAPGFPV
NCTC8325 FDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQLPTRGAIIYAISPKPKDAPGFPV
Newman FDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQLPTRGAIIYAISPKPKDAPGFPV
USA300_FPR3757 FDTDASVDVVKNGDLVGERYILGQDKYQVELLTNLDQLPTRGAIIYAISPKPKDAPGFPV
************************************************************
COL RAFAIKPSND
N315 RAFAIKPSND
NCTC8325 RAFAIKPSND
Newman RAFAIKPSND
USA300_FPR3757 RAFAIKPSND
**********