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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002057000
- symbol?: —
- synonym:
- description?: transposase
- transposase
- IS3 family transposase
- pseudogene
- transposase domain-containing protein
- transposase IS3/IS911 family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2539972..2540835
- synteny block?: BlockID0013790
- occurrence?: in 67% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0392
08BA02176:
C248_0467
11819-97:
—
6850:
—
71193:
ST398NM01_0486
ECT-R 2:
ECTR2_353
ED133:
—
ED98:
SAAV_0361
HO 5096 0412:
—
JH1:
SaurJH1_0452
JH9:
SaurJH9_0441
JKD6008:
SAA6008_00418
JKD6159:
SAA6159_00368
LGA251:
SARLGA251_03540
M013:
—
MRSA252:
SAR0416
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0415
Mu50:
SAV0418
MW2:
—
RF122:
—
ST398:
SAPIG0486
T0131:
SAT0131_00453
TCH60:
—
TW20:
SATW20_04910
USA300_TCH1516:
USA300HOU_0417
VC40:
SAVC_01720
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --------MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGP
N315 MKKVVNLIMTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGP
NCTC8325 --------MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGP
Newman --------MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGP
****************************************************
COL FNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
N315 FNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
NCTC8325 FNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
Newman FNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
**************************************