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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002119000
- symbol?: ssl10
- synonym:
- description?: staphylococcal superantigen-like protein 10
- staphylococcal superantigen-like protein 10
- superantigen-like protein
- superantigen-like protein SSL10
- exotoxin 4
- Exotoxin 14
- exotoxin 5
- staphylococcal/Streptococcal toxin, beta-grasp domain protein
- Staphylococcal enterotoxin-like toxin
- staphylococcal exotoxin
- superantigen-like protein, exotoxin 14
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2610769..2611452
- synteny block?: BlockID0014250
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0405 (set14)
08BA02176:
C248_0481 (set4)
11819-97:
MS7_0405
6850:
RSAU_000359
71193:
ST398NM01_0498
ECT-R 2:
ECTR2_365
ED133:
SAOV_0450
ED98:
SAAV_0373
HO 5096 0412:
SAEMRSA15_03600 (set4)
JH1:
SaurJH1_0465
JH9:
SaurJH9_0453
JKD6008:
SAA6008_00433 (set14)
JKD6159:
—
LGA251:
SARLGA251_03680 (set4)
M013:
M013TW_0391
MRSA252:
SAR0431 (set4)
MSHR1132:
—
MSSA476:
SAS0393
Mu3:
SAHV_0427 (set14)
Mu50:
SAV0429 (set14)
MW2:
MW0391 (set25)
RF122:
SAB0383 (set2)
ST398:
SAPIG0498
T0131:
SAT0131_00469
TCH60:
HMPREF0772_10087 (set4)
TW20:
SATW20_05060 (set4)
USA300_TCH1516:
USA300HOU_0432 (set25)
VC40:
SAVC_01780
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKFTALAKATLALGILTTGTLTTEVHSGHAKQNQKSVNKHDKEALYRYYTGKTMEMKNIS
N315 MKFTALAKATLALGILTTGTLTTEVHSGHAKQNQKSVNKHDKEALYRYYTGKTMEMKNIS
NCTC8325 MKFTALAKATLALGILTTGTLTTEVHSGHAKQNQKSVNKHDKEALYRYYTGKTMEMKNIS
Newman MKFTALAKATLALGILTTGTLTTEVHSGHAKQNQKSVNKHDKEALYRYYTGKTMEMKNIS
USA300_FPR3757 MKFTALAKATLALGILTTGTLTTEVHSGHAKQNQKSVNKHDKEALYRYYTGKTMEMKNIS
************************************************************
COL ALKHGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFFVQEKRDKHDIFYTVGGVI
N315 ALKHGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFFVQEKRDKHDIFYTVGGVI
NCTC8325 ALKHGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFFVQEKRDKHDIFYTVGGVI
Newman ALKHGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFFVQEKRDKHDIFYTVGGVI
USA300_FPR3757 ALKHGKNNLRFKFRGIKIQVLLPGNDKSKFQQRSYEGLDVFFVQEKRDKHDIFYTVGGVI
************************************************************
COL QNNKTSGVVSAPILNISKEKGEDAFVKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKT
N315 QNNKTSGVVSAPILNISKEKGEDAFVKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKT
NCTC8325 QNNKTSGVVSAPILNISKEKGEDAFVKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKT
Newman QNNKTSGVVSAPILNISKEKGEDAFVKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKT
USA300_FPR3757 QNNKTSGVVSAPILNISKEKGEDAFVKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKT
************************************************************
COL ISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQIKDIEVNLK
N315 ISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQIKDIEVNLK
NCTC8325 ISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQIKDIEVNLK
Newman ISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQIKDIEVNLK
USA300_FPR3757 ISKDGRVKISLKDGSFYNLDLRSKLKFKYMGEVIESKQIKDIEVNLK
***********************************************