PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002134000
• symbol^?: lpl1
• synonym:
• description^?: tandem-type lipoprotein

  descriptions from strain specific annotations:

  • tandem-type lipoprotein
  • tandem lipoprotein
  • lipoprotein
  • putative lipoprotein
  • staphylococcal tandem lipoprotein
  • staphylococcus tandem lipoproteins family protein
  • Tandem lipoprotein within Pathogenicity island 2
• strand^?: +
• coordinates^?: 2627137..2641015
• synteny block^?: BlockID0014400
• occurrence^?: in 42% of 33 strains

⊟Orthologs

COL:
—
N315:
SA0396 (lpl1)
NCTC8325:
—
Newman:
NWMN_0403 (lpl1nm)
USA300_FPR3757:
SAUSA300_0410
04-02981:
SA2981_0412 (lpl1)
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
ECTR2_371
ED133:
SAOV_0458
ED98:
SAAV_0379
HO 5096 0412:
—
JH1:
SaurJH1_0471
JH9:
SaurJH9_0459
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_03800
M013:
—
MRSA252:
SAR0439
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0434 (lpl1)
Mu50:
SAV0436 (lpl1)
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0438 (lpl11)
VC40:
—

⊟Genome Viewer

N315
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MKYKTKRRETMRYLKRLSWYISILILIVVIAGCGKGNETKEGSKEEQIKKSFAKTLDMYP
  Newman          MKYKTERREAMGYLKRFALYISVMILIFAIAGCGKGNETKEDSKEEQIKKSFAKTLDMYP
  USA300_FPR3757  MKYKTERREAMGYLKRFALYISVMILIFAIAGCGKGNETKEDSKEEQIKKSFAITLDMYP
                  *****:***:* ****:: ***::***..************.*********** ******
  
  N315            IKNLEDLYDKEGYRDSEFKKSDKGTWTIYTDFAKSNKPGELDDEGMVLNLDRNTRTAKGH
  Newman          IKNLEDLYDKEGYRDSEFKKGDKGMWTIYTDFAKSNKPGELDDEGMVLNLDRNTRTAKGH
  USA300_FPR3757  IKNLEDLYDKEGYRDSEFKKGDKGMWTIYTDFAKSNKPGELDDEGMVLNLDRNTRTAKGH
                  ********************.*** ***********************************
  
  N315            YFVTTFYRNGKLPDEKNYKIEMKNNKIILLDEVKDDKLKQKIENFKFFGQYANLKELRKY
  Newman          YFVTTFYRNGKLPDEKNYKIEMKNNKIILLDEVKDDKLKQKIENFKFFGQYANLKELRKY
  USA300_FPR3757  YFVTTFYRNGKLPDEKNYKIEMKNNKIILLDEVKDDKLKQKIENFKFFGQYANLKELRKY
                  ************************************************************
  
  N315            NNGDVSINENVPSYDVEYKMSNKDEIVKELRSRYNISTEKSPILKMHIDGDLKGSSVGYR
  Newman          NNGDVSINENVPSYDVEYKMSNKDEIVKELRSRYNISTEKSPILKMHIDGDLKGSSVGYR
  USA300_FPR3757  NNGDVSINENVPSYDVEYKMSNKDEIVKELRSRYNISTEKSPILKMHIDGDLKGSSVGYR
                  ************************************************************
  
  N315            KLEIDFSKRENSKLSVIEFLSYKPAKK
  Newman          KLEIDFSKRENSKLSVIEFLSYKPAKK
  USA300_FPR3757  KLEIDFSKRENSKLSVIEFLSYKPAKK
                  ***************************