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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002173000
- symbol?: —
- synonym:
- description?: sodium-dependent transporter
- sodium-dependent transporter
- sodium-dependent symporter protein
- sodium-dependent transporter, putative
- sodium:neurotransmitter symporter family protein
- Sodium/neurotransmitter symporter family protein
- sodium:neurotransmitter symporter
- Transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2676501..2677841
- synteny block?: BlockID0014740
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0434
08BA02176:
C248_0508
11819-97:
MS7_0432
6850:
RSAU_000391
71193:
ST398NM01_0524
ECT-R 2:
ECTR2_392
ED133:
SAOV_0476
ED98:
SAAV_0401
HO 5096 0412:
SAEMRSA15_03840
JH1:
SaurJH1_0493
JH9:
SaurJH9_0480
JKD6008:
SAA6008_00462
JKD6159:
SAA6159_00408
LGA251:
SARLGA251_03920
M013:
M013TW_0423
MRSA252:
SAR0458
MSHR1132:
SAMSHR1132_04030
MSSA476:
SAS0416
Mu3:
SAHV_0456
Mu50:
SAV0458
MW2:
MW0413
RF122:
SAB0408
ST398:
SAPIG0524
T0131:
SAT0131_00498
TCH60:
HMPREF0772_10064
TW20:
SATW20_05270
USA300_TCH1516:
—
VC40:
SAVC_01880
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -MKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLAMFLIFTIFVGLPLL
N315 MMKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLAMFLIFTIFVGLPLL
NCTC8325 -MKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLAMFLIFTIFVGLPLL
Newman MMKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLAMFLIFTIFVGLPLL
USA300_FPR3757 -MKRQQSQWKSSTGFILASAGSAIGLGAMWKFPYMAGIYGGGAFLAMFLIFTIFVGLPLL
***********************************************************
COL IMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGQVL
N315 IMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGQVL
NCTC8325 IMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGQVL
Newman IMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGQVL
USA300_FPR3757 IMEFTVGKMGRTYTTQIYSKLTGKKWLNIIGWNGNLAVFILFGFYSVIGGWIVIYIGQVL
************************************************************
COL WQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMIIVMLGVEKGLEKASKVMMPL
N315 WQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMIIVMLGVEKGLEKASKVMMPL
NCTC8325 WQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMIIVMLGVEKGLEKASKVMMPL
Newman WQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMIIVMLGVEKGLEKASKVMMPL
USA300_FPR3757 WQLVIFQRINHLQEMNFEAVISNPWLTVLGQGIFIFATMIIVMLGVEKGLEKASKVMMPL
************************************************************
COL LFVFLIVIVIKSLTLDGALEGVKFILQPRVSEITADGILFALGQSFFTLSLGTTGMITYA
N315 LFVFLIIIVIKSLTLDGALEGVKFILQPRVSEITADGILFALGQSFFTLSLGTTGMITYA
NCTC8325 LFVFLIVIVIKSLTLDGVLEGVKFILQPRVSEITADGILFALGQSFFTLSLGTTGMITYA
Newman LFVFLIVIVIKSLTLDGALEGVKFILQPRVSEITADGILFALGQSFFTLSLGTTGMITYA
USA300_FPR3757 LFVFLIVIVIKSLTLDGALEGVKFILQPRVSEITADGILFALGQSFFTLSLGTTGMITYA
******:**********.******************************************
COL SYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHSFGYEPQEGPGLLFKVLPMVFSQM
N315 SYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHSFGYEPQEGPGLLFKVLPMVFSQM
NCTC8325 SYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHSFGYEPQEGPGLLFKVLPMVFSQM
Newman SYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHSFGYEPQEGPGLLFKVLPMVFSQM
USA300_FPR3757 SYASKDMTIKSSAISIVVMNIFVSVLAGLAIFPALHSFGYEPQEGPGLLFKVLPMVFSQM
************************************************************
COL HLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTKNDNTKRKKVAVIGSILVFIISIPAT
N315 HLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTKNDNTKRKKVAVIGSILVFIISIPAT
NCTC8325 HLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTKNDNTKRKKVAVIGSILVFIISIPAT
Newman HLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTKNDNTKRKKVAVIGSILVFIISIPAT
USA300_FPR3757 HLGTLFYLGFLVLFLFAALTSSISLLELNVSNFTKNDNTKRKKVAVIGSILVFIISIPAT
************************************************************
COL LSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGALGTTLVVGQLLDKKLLQQYFGKDRFRL
N315 LSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGALGTTLVIGQLLDKKLLQQYFGKDRFRL
NCTC8325 LSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGALGTTLVVGQLLDKKLLQQYFGKDRFRL
Newman LSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGALGTTLVVGQLLDKKLLQQYFGKDRFRL
USA300_FPR3757 LSFGILKDVRFGAGTIFDNMDFIVSNVLMPLGALGTTLVVGQLLDKKLLQQYFGKDRFRL
***************************************:********************
COL FSGWYYLIKYAMPVVIILVFIVQLFS
N315 FNGWYYLIKYAMPVVIILVFIVQLFS
NCTC8325 FSGWYYLIKYAMPVVIILVFIVQLFS
Newman FSGWYYLIKYAMPVVIILVFIVQLFS
USA300_FPR3757 FSGWYYLIKYAMPVVIILVFIVQLFS
*.************************