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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002184000
- symbol?: —
- synonym:
- description?: hypothetical protein, YibE/F-like protein
- hypothetical protein, YibE/F-like protein
- YibE/F family protein
- membrane spanning protein
- yibE/F-like family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2687023..2688135
- synteny block?: BlockID0014850
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0445
08BA02176:
C248_0519
11819-97:
MS7_0443
6850:
RSAU_000403
71193:
ST398NM01_0535
ECT-R 2:
ECTR2_403
ED133:
SAOV_0487c
ED98:
SAAV_0412
HO 5096 0412:
SAEMRSA15_03950
JH1:
SaurJH1_0504
JH9:
SaurJH9_0491
JKD6008:
SAA6008_00473
JKD6159:
SAA6159_00419
LGA251:
SARLGA251_04030
M013:
M013TW_0434
MRSA252:
SAR0469
MSHR1132:
SAMSHR1132_04140
MSSA476:
SAS0427
Mu3:
SAHV_0467
Mu50:
SAV0470
MW2:
MW0424
RF122:
SAB0419c
ST398:
SAPIG0535
T0131:
SAT0131_00511
TCH60:
HMPREF0772_10053
TW20:
SATW20_05380
USA300_TCH1516:
USA300HOU_0470
VC40:
SAVC_01935
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQIIDVKHVSSTPTKDAQ
N315 --MKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQIIDVKHVSSTPTKDAQ
NCTC8325 MFLKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQIIDVKHVSSTPTKDAQ
Newman MFLKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQIIDVKHVSSTPTKDAQ
USA300_FPR3757 --MKYRNLFTKPFNIILGLFCIAFIGAILFTFNNENFYNKPIGQIIDVKHVSSTPTKDAQ
:*********************************************************
COL NNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFRTHEKVLLHISNKPSDAYI
N315 NNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFRTHEKVLLHISNKPSDAYI
NCTC8325 NNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFRTHEKVLLHISNKPSDAYI
Newman NNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFRTHEKVLLHISNKPSDAYI
USA300_FPR3757 NNRDIKYKNQLKVKILNGQFAGETTTINHQYVKSQADSEAFRTHEKVLLHISNKPSDAYI
************************************************************
COL IEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSIAILIAIYIHIQHSNINLFLL
N315 IEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSIAILIAIYIHIQHSNINLFLL
NCTC8325 IEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSIAILIAIYIHIQHSNINLFLL
Newman IEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSIAILIAIYIHIQHSNINLFLL
USA300_FPR3757 IEKKRDTLTVIITGLFLLTVLLVGRKVGLQSILSLILNSIAILIAIYIHIQHSNINLFLL
************************************************************
COL MTIAMICSTILTLLLVTGWHMRTLITIASTIIGTFLSIGLTELIIYMTDGKGIKYETMNF
N315 MTIAMICSTILTLLLVTGWHMRTLITIASTIIGTFLSIGLTELIIYMTDGKGIKYETMNF
NCTC8325 MTIAMICSTILTLLLVTGWHMRTLITIASTIIGTFLSIGLTELIIYMTDGKGIKYETMNF
Newman MTIAMICSTILTLLLVTGWHMRTLITIASTIIGTFLSIGLTELIIYMTDGKGIKYETMNF
USA300_FPR3757 MTIAMICSTILTLLLVTGWHMRTLITIASTIIGTFLSIGLTELIIYMADGKGIKYETMNF
***********************************************:************
COL LSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEILQRTPHISMRRWALAGRNIGQDIMG
N315 LSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEILQRTPHISMRRWALAGRNIGQDIMG
NCTC8325 LSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEILQRTPHISMRRWALAGRNIGQDIMG
Newman LSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEILQRTPHISMRRWALAGRNIGQDIMG
USA300_FPR3757 LSLPPKDIFLASVLIGSLGAIMDVAITIASGMHEILQRTPHISMRRWALAGRNIGQDIMG
************************************************************
COL TMTNILLFSYLSGALPMFLIFLKNANTVTYTISMNWSLEIARALTGGIGIVLTIPITILF
N315 TMTNILLFSYLSGALPMFLIFLKNANTVTYTISMNWSLEIARALTGGIGIVLTIPITILF
NCTC8325 TMTNILLFSYLSGALPMFLIFLKNANTVTYTISMNWSLEIARALTGGIGIVLTIPITILF
Newman TMTNILLFSYLSGALPMFLIFLKNANTVTYTISMNWSLEIARALTGGIGIVLTIPITILF
USA300_FPR3757 TMTNILLFSYLSGALPMFLIFLKNANTVTYTISMNWSLEIARALTGGIGIVLTIPITILF
************************************************************
COL MEIFETLRRAKQ
N315 MEIFETLRRAKQ
NCTC8325 MEIFETLRRAKQ
Newman MEIFETLRRAKQ
USA300_FPR3757 MEIFETLRRAKQ
************