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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002224000
- symbol?: —
- synonym:
- description?: endonuclease, putative
- endonuclease, putative
- GIY-YIG nuclease family protein
- endo/excinuclease domain protein
- endo/exonuclease amino terminal GIY-YIG domain protein
- excinuclease ABC subunit C
- GIY-YIG catalytic domain-containing protein
- putative endonuclease containing a URIdomain
- putative GIY-YIG nuclease
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2735013..2735261
- synteny block?: BlockID0015230
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0463
08BA02176:
C248_0542
11819-97:
MS7_0465
6850:
RSAU_000425
71193:
ST398NM01_0554
ECT-R 2:
ECTR2_428
ED133:
SAOV_0509
ED98:
SAAV_0434
HO 5096 0412:
SAEMRSA15_04140
JH1:
SaurJH1_0522
JH9:
SaurJH9_0509
JKD6008:
SAA6008_00492
JKD6159:
SAA6159_00439
LGA251:
SARLGA251_04220
M013:
M013TW_0457
MRSA252:
SAR0489
MSHR1132:
SAMSHR1132_04320
MSSA476:
SAS0445
Mu3:
SAHV_0485
Mu50:
SAV0488
MW2:
MW0443
RF122:
SAB0437
ST398:
SAPIG0554
T0131:
SAT0131_00533 (arsC)
TCH60:
HMPREF0772_10033
TW20:
SATW20_05560
USA300_TCH1516:
USA300HOU_0488
VC40:
SAVC_02025
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRRPVHLVYQEMYETKSEA
N315 MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRRPVHLVYQEMYETKSEA
NCTC8325 MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRRPVHLVYQEMYETKSEA
USA300_FPR3757 MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRRPVHLVYQEMYETKSEA
************************************************************
COL LKREYEIKTYTRQKKLRLIKER
N315 LKREYEIKTYTRQKKLRLIKER
NCTC8325 LKREYEIKTYTRQKKLRLIKER
USA300_FPR3757 LKREYEIKTYTRQKKLRLIKER
**********************