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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002349000
- symbol?: —
- synonym:
- description?: HAD family hydrolase
- HAD family hydrolase
- HAD superfamily hydrolase
- haloacid dehalogenase-like hydrolase
- Haloacid dehalogenase-like hydrolase, putative
- Phosphoglycolate phosphatase
- HAD hydrolase family protein
- haloacid dehalogenase
- indigoidine synthesis protein
- indigoidine systhesis protein
- putative haloacid dehalogenase-like hydrolase
- putative hydrolase, haloacid dehalogenase-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2888014..2888670
- synteny block?: BlockID0016480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0549
08BA02176:
C248_0647
11819-97:
MS7_0562
6850:
RSAU_000526
71193:
ST398NM01_0647
ECT-R 2:
ECTR2_526
ED133:
SAOV_0607
ED98:
SAAV_0535
HO 5096 0412:
SAEMRSA15_04990
JH1:
SaurJH1_0609
JH9:
SaurJH9_0595
JKD6008:
SAA6008_00580
JKD6159:
SAA6159_00526
LGA251:
SARLGA251_05080
M013:
M013TW_0560
MRSA252:
SAR0576
MSHR1132:
SAMSHR1132_05160
MSSA476:
SAS0530
Mu3:
SAHV_0570
Mu50:
SAV0572
MW2:
MW0527
RF122:
SAB0522
ST398:
SAPIG0647
T0131:
SAT0131_00633
TCH60:
HMPREF0772_12616
TW20:
SATW20_06420
USA300_TCH1516:
USA300HOU_0566
VC40:
SAVC_02450
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLILKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITHYMGIPIEESFLKL
N315 ---MKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITHYMGIPIEESFLKL
NCTC8325 ---MKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITHYMGIPIEESFLKL
Newman MLILKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITHYMGIPIEESFLKL
USA300_FPR3757 ---MKFDNYIFDFDGTLADTKKCGEVATQSAFKACGLTEPSSKEITHYMGIPIEESFLKL
:********************************************************
COL ADRPLDEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQGKKLFVVSSKKSDVL
N315 ADRPLDEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQGKKLFVVSSKKSDVL
NCTC8325 ADRPLDEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQGKKLFVVSSKKSDVL
Newman ADRPLDEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQGKKLFVVSSKKSDVL
USA300_FPR3757 ADRPLDEAALAKLIDTFRHTYQSIEKDYIYEFAGITEAITSLYNQGKKLFVVSSKKSDVL
************************************************************
COL ERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNSQQTVYIGDSTFDVEMAQ
N315 ERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNSQQTVYIGDSTFDVEMAQ
NCTC8325 ERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNSQQTVYIGDSTFDVEMAQ
Newman ERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNSQQTVYIGDSTFDVEMAQ
USA300_FPR3757 ERNLSAIGLNHLITEAVGSDQVSAYKPNPEGIHTIVQRYNLNSQQTVYIGDSTFDVEMAQ
************************************************************
COL RAGMQSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL
N315 HAGVPSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL
NCTC8325 RAGMQSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL
Newman RAGMQSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL
USA300_FPR3757 RAGMQSAAVTWGAHDARSLLHSNPDFIINDPSEINTVL
:**: *********************************