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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002352000
- symbol?: vraA
- synonym:
- description?: long-chain-fatty-acid--CoA ligase
- long-chain-fatty-acid--CoA ligase
- AMP-binding protein
- long-chain-fatty-acid--CoA ligase, putative
- long chain fatty acid CoA ligase vraA
- putative substrate--CoA ligase
- substrate--CoA ligase
- long chain fatty acid CoA ligase, VraA
- AMP-dependent synthetase and ligase
- Putative long chain fatty acid-CoA ligase vraA
- putative long chain fatty acid CoA ligase VraA (Acyl-CoAsynthetase)
- substrate--CoA ligase, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2891552..2893009
- synteny block?: BlockID0016510
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0552 (vraA)
08BA02176:
C248_0650
11819-97:
MS7_0564
6850:
RSAU_000528 (vraA)
71193:
ST398NM01_0649
ECT-R 2:
ECTR2_528
ED133:
SAOV_0609
ED98:
SAAV_0537
HO 5096 0412:
SAEMRSA15_05020
JH1:
SaurJH1_0612
JH9:
SaurJH9_0598
JKD6008:
SAA6008_00582 (vraA)
JKD6159:
SAA6159_00528 (vraA)
LGA251:
SARLGA251_05100
M013:
M013TW_0562
MRSA252:
SAR0580
MSHR1132:
SAMSHR1132_05180
MSSA476:
SAS0533
Mu3:
SAHV_0573 (vraA)
Mu50:
SAV0575 (vraA)
MW2:
MW0530 (vraA)
RF122:
SAB0525
ST398:
SAPIG0649
T0131:
SAT0131_00635
TCH60:
HMPREF0772_12614
TW20:
SATW20_06440
USA300_TCH1516:
USA300HOU_0568 (vraA)
VC40:
SAVC_02460
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESLQKYSLNPVVAINMKSP
N315 MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESLQKYSLNPVVAINMKSP
NCTC8325 MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESLQKYSLNPVVAINMKSP
Newman MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESLQKYSLNPVVAINMKSP
USA300_FPR3757 MNVILEQLKTHTQNKPNDIALHIDDETITYSQLNARITSAVESLQKYSLNPVVAINMKSP
************************************************************
COL VQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVIGDTGLMQNIDSPMFIDST
N315 VQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVIGDTGLMQNIDSPMFIDST
NCTC8325 VQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVIGDTGLMQNIDSPMFIDST
Newman VQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVIGDTGLMQNIDSPMFIDST
USA300_FPR3757 VQSIICYLALHRLHKVPMMMEGKWQSTIHRQLIEKYGIKDVIGDTGLMQNIDSPMFIDST
************************************************************
COL QLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEMLMLKNENAIAAPGPLSHSLT
N315 QLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEMLMLKNENAIAAPGPLSHSLT
NCTC8325 QLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEMLMLKNENAIAAPGPLSHSLT
Newman QLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEMLMLKNENAIAAPGPLSHSLT
USA300_FPR3757 QLQHYPNLLHIGFTSGTTGLPKAYYRDEDSWLASFEVNEMLMLKNENAIAAPGPLSHSLT
************************************************************
COL LYALLFALSSGRTFIGQTTFHPEKLLNQCHKISSYKVAMFLVPTMIKSLLLVYNNEHTIQ
N315 LYALLFALSSGRTFIGQTTFHPEKLLNQCHKISSYKVAMFLVPTMIKSLLLVYNNEHTIQ
NCTC8325 LYALLFALSSGRTFIGQTTFHPEKLLNQCHKISSYKVAMFLVPTMIKSLLLVYNNEHTIQ
Newman LYALLFALSSGRTFIGQTTFHPEKLLNQCHKISSYKVAMFLVPTMIKSLLLVYNNEHTIQ
USA300_FPR3757 LYALLFALSSGRTFIGQTTFHPEKLLNQCHKISSYKVAMFLVPTMIKSLLLVYNNEHTIQ
************************************************************
COL SFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETSFISYNLNQQAPVESVGVLFPNVEL
N315 SFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETSFISYNLNQQAPVESVGVLFPNVEL
NCTC8325 SFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETSFISYNLNQQAPVESVGVLFPNVEL
Newman SFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETSFISYNLNQQAPVESVGVLFPNVEL
USA300_FPR3757 SFFSSGDKLHSSIFKKIKNQANDINLIEFFGTSETSFISYNLNQQAPVESVGVLFPNVEL
************************************************************
COL KTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDEWFVTNDNGYVKEQYLYLTGRQQDMLI
N315 KTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDEWFVTNDNGYVKEQYLYLTGRQQDMLI
NCTC8325 KTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDEWFVTNDNGYVKEQYLYLTGRQQDMLI
Newman KTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDEWFVTNDNGYVKEQYLYLTGRQQDMLI
USA300_FPR3757 KTTNHDHNGIGTICIKSNMMFSGYVSEQCINNDEWFVTNDNGYVKEQYLYLTGRQQDMLI
************************************************************
COL IGGQNIYPAHVERLLTQSSSIDEAIIIGIPNERFGQIGVLLYSGDVTLTHKNVKQFLKKK
N315 IGGQNIYPAHVERLLTQSSSIDEAIIIGIPNERFGQIGVLLYSGDVTLTHKNVKQFLKKK
NCTC8325 IGGQNIYPAHVERLLTQSSSIDEAIIIGIPNERFGQIGVLLYSGDVTLTHKNVKQFLKKK
Newman IGGQNIYPAHVERLLTQSSSIDEAIIIGIPNERFGQIGVLLYSGDVTLTHKNVKQFLKKK
USA300_FPR3757 IGGQNIYPAHVERLLTQSSSIDEAIIIGIPNERFGQIGVLLYSGDVTLTHKNVKQFLKKK
************************************************************
COL VKRYEIPSMIHHVEKMYYTASGKIAREKMMSMYLRGEL
N315 VKRYEIPSMIHHVEKMYYTASGKIAREKMMSMYLRGEL
NCTC8325 VKRYEIPSMIHHVEKMYYTASGKIAREKMMSMYLRGEL
Newman VKRYEIPSMIHHVEKMYYTASGKIAREKMMSMYLRGEL
USA300_FPR3757 VKRYEIPSMIHHVEKMYYTASGKIAREKMMSMYLRGEL
**************************************