Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002355000
- symbol?: —
- synonym:
- description?: hypothetical protein
- strand?: +
- coordinates?: 2894492..2894762
- synteny block?: BlockID0016540
- occurrence?: in 94% of 33 strains
Suggest pan symbol of "vraP" and description of "VraC-stabilizing partner protein VraP" to align with PMID 33948657
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0555
08BA02176:
C248_0653
11819-97:
MS7_0567
6850:
—
71193:
ST398NM01_0652
ECT-R 2:
ECTR2_531
ED133:
SAOV_0612
ED98:
SAAV_0540
HO 5096 0412:
SAEMRSA15_05050
JH1:
SaurJH1_0615
JH9:
SaurJH9_0601
JKD6008:
SAA6008_00585
JKD6159:
SAA6159_00531
LGA251:
SARLGA251_05130
M013:
M013TW_0565
MRSA252:
SAR0583
MSHR1132:
SAMSHR1132_05210
MSSA476:
SAS0536
Mu3:
SAHV_0576
Mu50:
SAV0578
MW2:
MW0533
RF122:
SAB0528
ST398:
SAPIG0652
T0131:
SAT0131_00638
TCH60:
HMPREF0772_12611
TW20:
SATW20_06470
USA300_TCH1516:
USA300HOU_0571
VC40:
SAVC_02475
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSLETNQCQINYVKPILINENI
N315 MKFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSLETNQCQINYVKPILINENI
NCTC8325 MEFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSLETNQCQINYVKPILINENI
Newman MKFNEIWINEYLALVNDDNPIHNEIVPGQLVSQMMLMAMSLETNQCQINYVKPILINENI
*:**********************************************************
COL EFIEQHEHEIIAINDDGEIKIKISLSTKK
N315 EFIEQHEHEIIAINDDGEIKIKISLSTKK
NCTC8325 EFIEQHEHEIIAINDDGEIKIKISLSTKK
Newman EFIEQHEHEIIAINDDGEIKIKISLSTKK
*****************************