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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002451000
- symbol?: —
- synonym:
- description?: DUF443 domain-containing protein
- strand?: +
- coordinates?: 2961845..2962493
- synteny block?: BlockID0016840
- occurrence?: in 35% of 34 strains
⊟Additional information (user-provided)[edit | edit source]
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_00605
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS0557
Mu3:
—
Mu50:
—
MW2:
MW0553
RF122:
—
ST398:
—
T0131:
SAT0131_00662
TCH60:
—
TW20:
SATW20_06670
USA300_TCH1516:
USA300HOU_0593
VC40:
SAVC_02575
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
COL MEILLCEVRVVNKNPRYRIIKYKNDYLMIDLVSTWLVLFFPFINWLIPKKYVQISREDFD
NCTC8325 MEILLCEVRVVNKNPRYRIIKYKNDYLMIDLVSTWLVLFFPFINWLIPKKYVQISREDFD
Newman MEILLCEVRVVNKNPRYRIIKYKNDYLMIDLVSTWLVLFFPFINWLIPKKYVQISREDFD
USA300_FPR3757 MEILLCEVRVVNKNPRYRIIKYKNDYLMIDLVSTWLVLFFPFINWLIPKKYVQISREDFD
JSNZ MEKLLCEVRVVNKNPRYRIIKYKNDYLMIDLVSTWLVLFFPFINWLIPKRYVQISREEFD
** **********************************************:*******:**
COL NLNIVKPVKNKALWPAIGSILLFGTMFRDKIYIPDSHLEKNCVIIICSVLLLSILVFYIY
NCTC8325 NLNIVKPVKNKALWPAIGSILLFGTMFRDKIYIPDSHLEKNCVIIICSVLLLSILVFYIY
Newman NLNIVKPVKNKALWPAIGSILLFGTMFRDKIYIPDSHLEKNCVIIICSVLLLSILVFYIY
USA300_FPR3757 NLNIVKPVKNKALWPAIGSILLFGTMFRDKIYIPDSHLEKNCVIIICSVLLLSILVFYIY
JSNZ NLNIVKPVKNKALWPVIGSILLFGTMFRDKIYIPDSHLEKYCVIIICSVLLLCILVFYIY
***************.************************ ***********.*******
COL LNQKVKLSIYNDRSSNGKIMIFPSFKNLCFVLFSYFFCGGLSIMFLDVLISLSIQNIIVF
NCTC8325 LNQKVKLSIYNDRSSNGKIMIFPSFKNLCFVLFSYFFCGGLSIMFLDVLISLSIQNIIVF
Newman LNQKVKLSIYNDRSSNGKIMIFPSFKNLCFVLFSYFFCGGLSIMFLDVLISLSIQNIIVF
USA300_FPR3757 LNQKVKLSIYNDRSSNGKIMIFPSFKNLCFVLFSYFFCGGLSIMFLDVLISLSIQNIIVF
JSNZ LNQKVKLSIYNNRNSNGKIMIFPSFKNLCFVLFSYFFCGGLSIMFLDVLISLSIQNIIVF
***********:*.**********************************************
COL IAWVIMTMLFFFINMSSIIDKKIHVIYLRSYKY
NCTC8325 IAWVIMTMLFFFINMSSIIDKKIHVIYLRSYKY
Newman IAWVIMTMLFFFINMSSIIDKKIHVIYLRSYKY
USA300_FPR3757 IAWVIMTMLFFFINMSSIIDKKIHVIYLRSYKY
JSNZ IAWVIMTMLFFFLNMSSIIDKKIHVIYLRPYKH
************:****************.**: