PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002460000
• symbol^?: —
• synonym:
• description^?: DUF443 domain-containing protein

  descriptions from strain specific annotations:

  • DUF443 domain-containing protein
  • staphylococcus aureus paralogous family
• strand^?: +
• coordinates^?: 2967047..2967676
• synteny block^?: BlockID0016970
• occurrence^?: in 39% of 33 strains

⊟Orthologs

COL:
SACOL0651
N315:
—
NCTC8325:
SAOUHSC_00596
Newman:
NWMN_0567
USA300_FPR3757:
SAUSA300_0585
04-02981:
—
08BA02176:
C248_0679
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_00613
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS0564
Mu3:
—
Mu50:
—
MW2:
MW0559
RF122:
SAB0548
ST398:
SAPIG0676
T0131:
—
TCH60:
—
TW20:
SATW20_06730
USA300_TCH1516:
USA300HOU_0601
VC40:
SAVC_02615

⊟Genome Viewer

COL
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLLCDVRVIYKNPKYKVIQHNGEYLLVDLVSTWFVYFFPFINWFIPKKYAIISEEEFENL
  NCTC8325        MLLCDVRVIYKNPKYKVIQHNGEYLLVDLVSTWFVYFFPFINWFIPKKYAIISEEEFENL
  Newman          MLLCDVRVIYKNPKYKVIQHNGEYLLVDLVSTWFVYFFPFINWFIPKKYAIISEEEFENL
  USA300_FPR3757  MLLCDVRVIYKNPKYKVIQHNGEYLLVDLVSTWFVYFFPFINWFIPKKYAIISEEEFENL
                  ************************************************************
  
  COL             NVVKPNKNNVFWSVIGSSVLFGVTLRKYIHVFDVQLDKLVVMILCALALICVIVFYFNLN
  NCTC8325        NVVKPNKNNVFWSVIGSSVLFGVTLRKYIHVFDVQLDKLVVMILCALALICVIVFYFNLN
  Newman          NVVKPNKNNVFWSVIGSSVLFGVTLRKYIHVFDVQLDKLVVMILCALALICVIVFYFNLN
  USA300_FPR3757  NVVKPNKNNVFWSVIGSSVLFGVTLRKYIHVFDVQLDKLVVMILCALALICVIVFYFNLN
                  ************************************************************
  
  COL             RKLKLKVFDTNIEKNKRVILIPTFKLGCFLVFGYIFAGSFSIFSLIALMTIEPQNIIIFI
  NCTC8325        RKLKLKVFDTNIEKNKRVILIPTFKLGCFLVFGYIFAGSFSIFSLIALMTIEPQNIIIFI
  Newman          RKLKLKVFDTNIEKNKRVILIPTFKLGCFLVFGYIFAGSFSIFSLIALMTIEPQNIIIFI
  USA300_FPR3757  RKLKLKVFDTNIEKNKRVILIPTFKLGCFLVFGYIFAGSFSIFSLIALMTIEPQNIIIFI
                  ************************************************************
  
  COL             YWIMMTMLFFLLNMTSIGNEKVRVIMKNN
  NCTC8325        YWIMMTMLFFLLNMTSIGNEKVRVIMKNN
  Newman          YWIMMTMLFFLLNMTSIGNEKVRVIMKNN
  USA300_FPR3757  YWIMMTMLFFLLNMTSIGNEKVRVIMKNN
                  *****************************