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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002469000
- symbol?: —
- synonym:
- description?: YwhD family protein
- YwhD family protein
- YwhD like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2984599..2985135
- synteny block?: BlockID0017050
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0581
08BA02176:
C248_0688
11819-97:
MS7_0657
6850:
RSAU_000561
71193:
ST398NM01_0685
ECT-R 2:
ECTR2_557
ED133:
SAOV_0639
ED98:
SAAV_0568
HO 5096 0412:
SAEMRSA15_05320
JH1:
SaurJH1_0642
JH9:
SaurJH9_0627
JKD6008:
SAA6008_00622
JKD6159:
SAA6159_00561
LGA251:
SARLGA251_05400
M013:
M013TW_0593
MRSA252:
SAR0612
MSHR1132:
SAMSHR1132_05470
MSSA476:
SAS0572
Mu3:
SAHV_0602
Mu50:
SAV0604
MW2:
MW0567
RF122:
SAB0556
ST398:
SAPIG0685
T0131:
SAT0131_00671
TCH60:
HMPREF0772_12582
TW20:
SATW20_06810
USA300_TCH1516:
—
VC40:
SAVC_02660
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHAR
N315 -----MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHAR
NCTC8325 MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHAR
Newman MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHAR
USA300_FPR3757 MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHAR
:******************************************************
COL AKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKS
N315 AKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKS
NCTC8325 AKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKS
Newman AKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKS
USA300_FPR3757 AKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKS
************************************************************
COL MPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
N315 MPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN
NCTC8325 MPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
Newman MPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
USA300_FPR3757 MPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
****************************************** **********