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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002478000
- symbol?: —
- synonym:
- description?: HAD family hydrolase
- HAD family hydrolase
- HAD superfamily hydrolase
- haloacid dehalogenase-like hydrolase
- haloacid dehalogenase-like hydrolase, putative
- HAD hydrolase family protein
- haloacid dehalogenase
- haloacid dehalogenase hydrolase
- haloacid dehalogenase-like family hydrolase
- L-2-haloalkanoic acid dehalogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2996279..2996998
- synteny block?: BlockID0017140
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0588
08BA02176:
C248_0695
11819-97:
MS7_0664
6850:
RSAU_000568
71193:
ST398NM01_0692
ECT-R 2:
ECTR2_564
ED133:
SAOV_0647
ED98:
SAAV_0575
HO 5096 0412:
SAEMRSA15_05390
JH1:
SaurJH1_0649
JH9:
SaurJH9_0634
JKD6008:
SAA6008_00629
JKD6159:
SAA6159_00568
LGA251:
SARLGA251_05470
M013:
M013TW_0600
MRSA252:
SAR0620
MSHR1132:
SAMSHR1132_05550
MSSA476:
SAS0579
Mu3:
SAHV_0609
Mu50:
SAV0611
MW2:
MW0575
RF122:
SAB0564
ST398:
SAPIG0692
T0131:
SAT0131_00678 (vraS)
TCH60:
HMPREF0772_12575
TW20:
SATW20_06880
USA300_TCH1516:
USA300HOU_0617
VC40:
SAVC_02700
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDN
N315 MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDN
NCTC8325 MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDN
Newman MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDN
USA300_FPR3757 MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDN
************************************************************
COL DKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIAN
N315 DKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIAN
NCTC8325 DKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIAN
Newman DKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIAN
USA300_FPR3757 DKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIAN
************************************************************
COL GKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDAL
N315 GKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDAL
NCTC8325 GKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDAL
Newman GKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDAL
USA300_FPR3757 GKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDAL
************************************************************
COL NDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
N315 NDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
NCTC8325 NDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
Newman NDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
USA300_FPR3757 NDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
***********************************************************