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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002519000
- symbol?: pbp4
- synonym:
- description?: D-alanyl-D-alanine carboxypeptidase
- D-alanyl-D-alanine carboxypeptidase
- penicillin-binding protein 4
- penicillin binding protein 4, putative
- Serine-type D-Ala-D-Ala carboxypeptidase
- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
- D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein PBP4
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3030697..3031992
- synteny block?: BlockID0017550
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0618
08BA02176:
C248_0724 (pbp4)
11819-97:
MS7_0693 (pbp4)
6850:
RSAU_000598 (pbp4)
71193:
ST398NM01_0721
ECT-R 2:
ECTR2_594
ED133:
SAOV_0677c (pbp4)
ED98:
SAAV_0605 (pbp4)
HO 5096 0412:
SAEMRSA15_05680 (pbp4)
JH1:
SaurJH1_0680
JH9:
SaurJH9_0665
JKD6008:
SAA6008_00659 (pbp4)
JKD6159:
SAA6159_00597 (pbp4)
LGA251:
SARLGA251_05760 (pbp4)
M013:
M013TW_0630
MRSA252:
SAR0652 (pbp4)
MSHR1132:
SAMSHR1132_05880
MSSA476:
SAS0608
Mu3:
SAHV_0639 (pbp4)
Mu50:
SAV0642 (pbp4)
MW2:
MW0604 (pbp4)
RF122:
SAB0592c (pbp4)
ST398:
SAPIG0721
T0131:
SAT0131_00711
TCH60:
HMPREF0772_12545 (dacB)
TW20:
SATW20_07170 (pbp4)
USA300_TCH1516:
USA300HOU_0662 (pbp4)
VC40:
SAVC_02845
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQ
N315 MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQ
NCTC8325 MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQ
Newman MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQ
USA300_FPR3757 MKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQ
************************************************************
COL LLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKL
N315 LLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKL
NCTC8325 LLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKL
Newman LLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKL
USA300_FPR3757 LLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKL
************************************************************
COL YPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPT
N315 YPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPT
NCTC8325 YPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPT
Newman YPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPT
USA300_FPR3757 YPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPT
************************************************************
COL GAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYT
N315 GAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYT
NCTC8325 GAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYT
Newman GAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYT
USA300_FPR3757 GAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAVTYYT
********:***************************************************
COL FNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQR
N315 FNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQR
NCTC8325 FNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQR
Newman FNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQR
USA300_FPR3757 FNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQR
************************************************************
COL NMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGK
N315 NMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGK
NCTC8325 NMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGK
Newman NMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGK
USA300_FPR3757 NMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGK
************************************************************
COL VHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGTCLVAGLALIVH
N315 VHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGACLVAGLALIVH
NCTC8325 VHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGTCLVAGLALIVH
Newman VHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGTCLVAGLALIVH
USA300_FPR3757 VHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGTCLVAGLALIVH
************************************************:***********
COL MIINRLFRKRK
N315 MIINRLFRKRK
NCTC8325 MIINRLFRKRK
Newman MIINRLFRKRK
USA300_FPR3757 MIINRLFRKRK
***********