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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002537000
- symbol?: graX
- synonym:
- description?: NAD(P)-dependent oxidoreductase
- NAD(P)-dependent oxidoreductase
- NAD-dependent epimerase/dehydratase, putative
- NADH dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3048206..3048979
- synteny block?: BlockID0017730
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0634
08BA02176:
C248_0742
11819-97:
MS7_0708
6850:
RSAU_000634
71193:
ST398NM01_0736
ECT-R 2:
ECTR2_609
ED133:
SAOV_0692
ED98:
SAAV_0620
HO 5096 0412:
SAEMRSA15_05840
JH1:
SaurJH1_0696
JH9:
SaurJH9_0681
JKD6008:
SAA6008_00674
JKD6159:
SAA6159_00612
LGA251:
SARLGA251_05910
M013:
M013TW_0645
MRSA252:
SAR0668
MSHR1132:
SAMSHR1132_06040
MSSA476:
SAS0623
Mu3:
SAHV_0655
Mu50:
SAV0658
MW2:
MW0620
RF122:
SAB0607
ST398:
SAPIG0736
T0131:
SAT0131_00728
TCH60:
HMPREF0772_12530
TW20:
SATW20_07330
USA300_TCH1516:
USA300HOU_0679
VC40:
SAVC_02920
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
N315 MKPKVLLAGGTGYIGKYLSEVIENDAELFTISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
NCTC8325 MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
Newman MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
USA300_FPR3757 MKPKVLLAGGTGYIGKYLSEVIENDAELFAISKYPDNKKTDDVEMTWIQCDIFHYEQVVA
*****************************:******************************
COL AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
N315 AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
NCTC8325 AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
Newman AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
USA300_FPR3757 AMNQIDIAVFFIDPTKNSAKITQSSARDLTLIAADNFGRAAAINQVKKVIYIPGSRYDNE
************************************************************
COL TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
N315 TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
NCTC8325 TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
Newman TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
USA300_FPR3757 TIERLGAYGTPVETTNLVFKRSLVNVELQVSKYDDVRSTMKVVLPKGWTLKNVVNHFIAW
************************************************************
COL MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
N315 MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
NCTC8325 MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
Newman MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
USA300_FPR3757 MGYTKGTFVKTEKSHDQFKIYIKNKVRPLAVFKIEETADGIITLILLSGSLVKKYTVNQG
************************************************************
COL KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
N315 KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
NCTC8325 KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
Newman KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
USA300_FPR3757 KLEFRLIKESAVVYIHLYDYIPRLFWPIYYFIQAPMQKMMIHGFEVDCRIKDFQSRLKSG
************************************************************
COL ENMKYTK
N315 ENMKYTK
NCTC8325 ENMKYTK
Newman ENMKYTK
USA300_FPR3757 ENMKYTK
*******