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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002578000
- symbol?: —
- synonym:
- description?: DNA-binding protein
- DNA-binding protein
- putative DUF296-containing protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3090433..3090855
- synteny block?: BlockID0018140
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0671
08BA02176:
C248_0778
11819-97:
MS7_0745
6850:
RSAU_000669
71193:
ST398NM01_0771
ECT-R 2:
ECTR2_645
ED133:
SAOV_0728c
ED98:
SAAV_0656
HO 5096 0412:
SAEMRSA15_06200
JH1:
SaurJH1_0734
JH9:
SaurJH9_0718
JKD6008:
SAA6008_00710
JKD6159:
SAA6159_00649
LGA251:
SARLGA251_06270
M013:
M013TW_0680
MRSA252:
SAR0747
MSHR1132:
SAMSHR1132_06390
MSSA476:
SAS0659
Mu3:
SAHV_0691
Mu50:
SAV0694
MW2:
MW0656
RF122:
SAB0643c
ST398:
SAPIG0771
T0131:
SAT0131_00764
TCH60:
HMPREF0772_12493
TW20:
SATW20_07690
USA300_TCH1516:
USA300HOU_0717
VC40:
SAVC_03105
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLQKSNHTILLVLEKGEDIVECITTFADDQDLTFTSVSGIGACDDVVLKFFNLTTKQYE
N315 MKLQKSNHTILLVLEKGEDIVECITTFADDQDLTFTSVSGIGACDDVVLKFFNLTTKQYE
NCTC8325 MKLQKSNHTILLVLEKGEDIVECITTFADDQDLTFTSVSGIGACDDVVLKFFNLTTKQYE
Newman MKLQKSNHTILLVLEKGEDIVECITTFADDQDLTFTSVSGIGACDDVVLKFFNLTTKQYE
USA300_FPR3757 MKLQKSNHTILLVLEKGEDIVECITTFADDQDLTFTSVSGIGACDDVVLKFFNLTTKQYE
************************************************************
COL EKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYETFSGHLAKAIVSATAEIILTVT
N315 EKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYETFSGHLAKAIVSATAEIILTVT
NCTC8325 EKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYETFSGHLAKAIVSATAEIILTVT
Newman EKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYETFSGHLAKAIVSATAEIILTVT
USA300_FPR3757 EKHITEPLELTSLLGNISRLDNGHFAHLHATFGTQSYETFSGHLAKAIVSATAEIILTVT
************************************************************
COL DLDIQRSFKDAVGLNLLDPQ
N315 DLDIQRSFKDAVGLNLLDPQ
NCTC8325 DLDIQRSFKDAVGLNLLDPQ
Newman DLDIQRSFKDAVGLNLLDPQ
USA300_FPR3757 DLDIQRSFKDAVGLNLLDPQ
********************