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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002655000
- symbol?: —
- synonym:
- description?: YigZ family protein
- YigZ family protein
- YvyE protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3153697..3154152
- synteny block?: BlockID0018900
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0726
08BA02176:
C248_0835
11819-97:
MS7_0798
6850:
RSAU_000723
71193:
ST398NM01_0824
ECT-R 2:
ECTR2_698
ED133:
SAOV_0785c
ED98:
SAAV_0710
HO 5096 0412:
SAEMRSA15_06740
JH1:
SaurJH1_0789
JH9:
SaurJH9_0772
JKD6008:
SAA6008_00763
JKD6159:
SAA6159_00703
LGA251:
SARLGA251_06810
M013:
M013TW_0735
MRSA252:
SAR0802
MSHR1132:
SAMSHR1132_06930
MSSA476:
SAS0713
Mu3:
SAHV_0745
Mu50:
SAV0748
MW2:
MW0710
RF122:
SAB0700c
ST398:
SAPIG0824
T0131:
SAT0131_00820
TCH60:
HMPREF0772_12435
TW20:
SATW20_08230
USA300_TCH1516:
USA300HOU_0775
VC40:
SAVC_03375
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIKKEHKDATHNCSAYTIG
N315 MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIKKEHKDATHNCSAYTIG
NCTC8325 MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIKKEHKDATHNCSAYTIG
Newman MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIKKEHKDATHNCSAYTIG
USA300_FPR3757 MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIKKEHKDATHNCSAYTIG
************************************************************
COL PEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYFGGIKLGGGGLIRAYSGAV
N315 PEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYFGGIKLGGGGLIRAYSGAV
NCTC8325 PEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYFGGIKLGGGGLIRAYSGAV
Newman PEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYFGGIKLGGGGLIRAYSGAV
USA300_FPR3757 PEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYFGGIKLGGGGLIRAYSGAV
************************************************************
COL RDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFMLRNQTYTDKVSYYIDVVKSD
N315 RDVIYDVGRVELREAVPCIVTLNYDQTGKFEYELASTHFMLRNQTYTDKVSYYIDVVKSD
NCTC8325 RDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFMLRNQTYTDKVSYYIDVVKSD
Newman RDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFMLRNQTYTDKVSYYIDVVKSD
USA300_FPR3757 RDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFMLRNQTYTDKVSYYIDVVKSD
******:*****************************************************
COL YEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE
N315 YEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE
NCTC8325 YEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE
Newman YEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE
USA300_FPR3757 YEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE
*********************************