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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002672000
- symbol?: uvrB
- synonym:
- description?: excinuclease ABC subunit B
- excinuclease ABC subunit B
- excinuclease ABC subunit UvrB
- exinuclease ABC subunit B
- excinuclease ABC, B subunit
- excision endonuclease subunit UvrB
- UvrABC system protein B
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3167411..3168491
- synteny block?: BlockID0019070
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0736 (uvrB)
08BA02176:
C248_0845 (uvrB)
11819-97:
MS7_0808 (uvrB)
6850:
RSAU_000733 (uvrB)
71193:
ST398NM01_0834
ECT-R 2:
ECTR2_708 (uvrB)
ED133:
SAOV_0795
ED98:
SAAV_0721 (uvrB)
HO 5096 0412:
SAEMRSA15_06840 (uvrB)
JH1:
SaurJH1_0799
JH9:
SaurJH9_0782
JKD6008:
SAA6008_00773 (uvrB)
JKD6159:
SAA6159_00713 (uvrB)
LGA251:
SARLGA251_06910 (uvrB)
M013:
M013TW_0745
MRSA252:
SAR0812 (uvrB)
MSHR1132:
SAMSHR1132_07030
MSSA476:
SAS0723
Mu3:
SAHV_0755 (uvrB)
Mu50:
SAV0758 (uvrB)
MW2:
MW0720 (uvrB)
RF122:
SAB0711 (uvrB)
ST398:
SAPIG0834 (uvrB)
T0131:
SAT0131_00830
TCH60:
HMPREF0772_12423 (uvrB)
TW20:
SATW20_08330 (uvrB)
USA300_TCH1516:
USA300HOU_0786 (uvrB)
VC40:
SAVC_03425
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTMVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEV
N315 MTMVEHYPFKIHSDFEPQGDQPQAIKEIVDGIKAGKRHQTLLGATGTGKTFTMSNVIKEV
NCTC8325 --MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEV
Newman --MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEV
USA300_FPR3757 --MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEV
***************************:******************************
COL GKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASIN
N315 GKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASIN
NCTC8325 GKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASIN
Newman GKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDAFMEKDASIN
USA300_FPR3757 GKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASIN
**************************************************:*:*******
COL DEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKL
N315 DEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKL
NCTC8325 DEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKL
Newman DEIDQVRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKL
USA300_FPR3757 DEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKL
*****:******************************************************
COL VDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLK
N315 VDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLK
NCTC8325 VDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLK
Newman VDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLK
USA300_FPR3757 VDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLK
************************************************************
COL EREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEM
N315 EREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEM
NCTC8325 EREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEM
Newman EREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEM
USA300_FPR3757 EREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEM
************************************************************
COL MREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRA
N315 MREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRA
NCTC8325 MREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLGKVRTSP---------------
Newman MREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRA
USA300_FPR3757 MREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRA
************************************** : *
COL RKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTG
N315 RKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTG
NCTC8325 ------------------------------------------------------------
Newman RKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTG
USA300_FPR3757 RKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTG
COL LLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLH
N315 LLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLH
NCTC8325 ------------------------------------------------------------
Newman LLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLH
USA300_FPR3757 LLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLH
COL SEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQ
N315 SEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQ
NCTC8325 ------------------------------------------------------------
Newman SEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQ
USA300_FPR3757 SEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQ
COL TIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLI
N315 TIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLI
NCTC8325 ------------------------------------------------------------
Newman TIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLI
USA300_FPR3757 TIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLI
COL SATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELK
N315 SATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELK
NCTC8325 ------------------------------------------------------------
Newman SATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELK
USA300_FPR3757 SATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELK
COL AEG
N315 AEG
NCTC8325 ---
Newman AEG
USA300_FPR3757 AEG