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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002680000
- symbol?: lgt
- synonym:
- description?: prolipoprotein diacylglyceryl transferase
- strand?: +
- coordinates?: 3178720..3179562
- synteny block?: BlockID0019120
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0739 (lgt)
08BA02176:
C248_0848 (lgt)
11819-97:
MS7_0811 (lgt)
6850:
RSAU_000736 (lgt)
71193:
ST398NM01_0837
ECT-R 2:
ECTR2_711 (lgt)
ED133:
SAOV_0798
ED98:
SAAV_0724 (lgt)
HO 5096 0412:
SAEMRSA15_06870 (lgt)
JH1:
SaurJH1_0802
JH9:
SaurJH9_0785
JKD6008:
SAA6008_00776 (lgt)
JKD6159:
SAA6159_00718 (lgt)
LGA251:
SARLGA251_06940 (lgt)
M013:
M013TW_0748
MRSA252:
SAR0815 (lgt)
MSHR1132:
SAMSHR1132_07060
MSSA476:
SAS0726
Mu3:
SAHV_0758 (lgt)
Mu50:
SAV0761 (lgt)
MW2:
MW0723 (lgt)
RF122:
SAB0714 (lgt)
ST398:
SAPIG0837 (lgt)
T0131:
SAT0131_00833
TCH60:
HMPREF0772_12420 (lgt)
TW20:
SATW20_08360 (lgt)
USA300_TCH1516:
USA300HOU_0789 (lgt)
VC40:
SAVC_03440
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSA
N315 MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSA
NCTC8325 MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSA
Newman MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSA
USA300_FPR3757 MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSA
************************************************************
COL LFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQ
N315 LFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQ
NCTC8325 LFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQ
Newman LFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQ
USA300_FPR3757 LFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQ
************************************************************
COL IGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTF
N315 IGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTF
NCTC8325 IGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTF
Newman IGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTF
USA300_FPR3757 IGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTF
*****************************.******************************
COL LYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQL
N315 LYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQL
NCTC8325 LYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQL
Newman LYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQL
USA300_FPR3757 LYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQL
************************************************************
COL VSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
N315 VSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
NCTC8325 VSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
Newman VSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
USA300_FPR3757 VSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
***************************************