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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002708000
- symbol?: tpiA
- synonym:
- description?: triosephosphate isomerase
- strand?: +
- coordinates?: 3197246..3198107
- synteny block?: BlockID0019400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0752 (tpi)
08BA02176:
C248_0865 (tpiA)
11819-97:
MS7_0825 (tpiA)
6850:
RSAU_000752 (tpiA)
71193:
ST398NM01_0853
ECT-R 2:
ECTR2_725 (tpiA)
ED133:
SAOV_0816
ED98:
SAAV_0740 (tpiA)
HO 5096 0412:
SAEMRSA15_07010 (tpiA)
JH1:
SaurJH1_0815 (tpiA)
JH9:
SaurJH9_0799 (tpiA)
JKD6008:
SAA6008_00789 (tpi)
JKD6159:
SAA6159_00731 (tpi)
LGA251:
SARLGA251_07080 (tpiA)
M013:
M013TW_0765
MRSA252:
SAR0830 (tpiA)
MSHR1132:
SAMSHR1132_07200
MSSA476:
SAS0740 (tpiA)
Mu3:
SAHV_0771 (tpiA)
Mu50:
SAV0774 (tpiA)
MW2:
MW0736 (tpiA)
RF122:
SAB0730 (tpiA)
ST398:
SAPIG0853 (tpiA)
T0131:
SAT0131_00847 (hlb)
TCH60:
HMPREF0772_12404 (tpiA)
TW20:
SATW20_08490 (tpiA)
USA300_TCH1516:
USA300HOU_0804 (tpiA)
VC40:
SAVC_03515 (tpiA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQG
N315 MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQG
NCTC8325 MRTPIIAGNWKMNKTVQEAKDFVNTLPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQG
Newman MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQG
USA300_FPR3757 MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQG
************************:***********************************
COL LEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFK
N315 LEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFK
NCTC8325 LEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFK
Newman LEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFK
USA300_FPR3757 LEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFK
************************************************************
COL HGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSS
N315 HGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSS
NCTC8325 HGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSS
Newman HGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSS
USA300_FPR3757 HGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSS
************************************************************
COL TSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASL
N315 TSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASL
NCTC8325 TSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASL
Newman TSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASL
USA300_FPR3757 TSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASL
************************************************************
COL KVEDFVQLLEGAK
N315 KVEDFVQLLEGAK
NCTC8325 KVEDFVQLLEGAK
Newman KVEDFVQLLEGAK
USA300_FPR3757 KVEDFVQLLEGAK
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