PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002806000
• symbol^?: —
• synonym:
• description^?: membrane protein
• strand^?: -
• coordinates^?: 3272636..3272824
• synteny block^?: BlockID0019970
• occurrence^?: in 79% of 33 strains

⊟Orthologs

COL:
—
N315:
SAS018
NCTC8325:
SAOUHSC_00823
Newman:
NWMN_0765
USA300_FPR3757:
—
04-02981:
SA2981_0775
08BA02176:
C248_0890
11819-97:
MS7_0848
6850:
—
71193:
ST398NM01_0876
ECT-R 2:
ECTR2_748
ED133:
SAOV_0837c
ED98:
SAAV_0766
HO 5096 0412:
SAEMRSA15_07230
JH1:
SaurJH1_0837
JH9:
SaurJH9_0821
JKD6008:
SAA6008_00812
JKD6159:
SAA6159_00752
LGA251:
—
M013:
M013TW_0787
MRSA252:
SAR0852
MSHR1132:
SAMSHR1132_07450
MSSA476:
SAS0761
Mu3:
SAHV_0816
Mu50:
SAV0820
MW2:
MW0774
RF122:
SAB0753c
ST398:
SAPIG0876
T0131:
—
TCH60:
HMPREF0772_12382
TW20:
—
USA300_TCH1516:
—
VC40:
SAVC_03630

⊟Genome Viewer

N315
NCTC8325
Newman

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFG
  NCTC8325        MSLHFAILFWLALIFLVAATFILVLMKKTSKESKKESYLSFTVILYIFGFAILIYTFIFG
  Newman          MSLHFAILFWLALIFLVAATFILVLMKKTSKESKKESYLSFTIILYIFGFAILIYTFIFG
                  *****************************.************:*****************
  
  N315            VL
  NCTC8325        VL
  Newman          VL
                  **