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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002817000
- symbol?: aroD
- synonym:
- description?: 3-dehydroquinase
- 3-dehydroquinase
- 3-dehydroquinate dehydratase
- 3-dehydroquinate dehydratase, type I
- type I 3-dehydroquinate dehydratase
- 3-dehydroquinate dehydratase I AroC I
- putative type I 3-dehydroquinase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3277060..3277776
- synteny block?: BlockID0020080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0784 (aroC)
08BA02176:
C248_0897
11819-97:
MS7_0855 (aroD)
6850:
RSAU_000779 (aroD)
71193:
ST398NM01_0883
ECT-R 2:
ECTR2_755 (aroD)
ED133:
SAOV_0845
ED98:
SAAV_0775 (aroD)
HO 5096 0412:
SAEMRSA15_07310
JH1:
SaurJH1_0845
JH9:
SaurJH9_0828
JKD6008:
SAA6008_00819 (aroD)
JKD6159:
SAA6159_00760 (aroD)
LGA251:
SARLGA251_07350
M013:
M013TW_0794
MRSA252:
SAR0860
MSHR1132:
SAMSHR1132_07530
MSSA476:
SAS0769
Mu3:
SAHV_0825
Mu50:
SAV0829
MW2:
MW0782
RF122:
SAB0760
ST398:
SAPIG0883 (aroD)
T0131:
SAT0131_00903 (sdrH)
TCH60:
HMPREF0772_12374 (aroD)
TW20:
SATW20_08780
USA300_TCH1516:
USA300HOU_0836 (aroD)
VC40:
SAVC_03670
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQ
N315 MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQ
NCTC8325 MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQ
Newman MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQ
USA300_FPR3757 MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQ
************************************************************
COL DSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITH
N315 DSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIEWQADIDIEKHQRIIKH
NCTC8325 DSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITH
Newman DSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITH
USA300_FPR3757 DSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITH
******************** ** **********************************.*
COL LQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST
N315 LQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST
NCTC8325 LQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST
Newman LQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST
USA300_FPR3757 LQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST
************************************************************
COL FSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
N315 FSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
NCTC8325 FSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
Newman FSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
USA300_FPR3757 FSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
************************************** *******************