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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002893000
- symbol?: —
- synonym:
- description?: DUF368 domain-containing protein
- DUF368 domain-containing protein
- putative DUF368-containing protein
- integral membrane protein
- Membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3338267..3339118
- synteny block?: BlockID0020590
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0796
08BA02176:
C248_0910
11819-97:
MS7_0868
6850:
RSAU_000791
71193:
ST398NM01_0896
ECT-R 2:
ECTR2_768
ED133:
SAOV_0858c
ED98:
SAAV_0812
HO 5096 0412:
SAEMRSA15_07430
JH1:
SaurJH1_0858
JH9:
SaurJH9_0842
JKD6008:
SAA6008_00863
JKD6159:
SAA6159_00772
LGA251:
SARLGA251_07700
M013:
M013TW_0833
MRSA252:
SAR0875
MSHR1132:
SAMSHR1132_07650
MSSA476:
SAS0783
Mu3:
SAHV_0837
Mu50:
SAV0841
MW2:
MW0794
RF122:
SAB0773c
ST398:
SAPIG0896
T0131:
SAT0131_00940
TCH60:
HMPREF0772_12335
TW20:
SATW20_09130
USA300_TCH1516:
USA300HOU_0869
VC40:
SAVC_03740
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIP
N315 MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIP
NCTC8325 MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIP
Newman MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIP
USA300_FPR3757 MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIP
************************************************************
COL IIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMV
N315 IIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMV
NCTC8325 IIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMV
Newman IIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMV
USA300_FPR3757 IIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMV
************************************************************
COL IAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMCASSAMLLPGISGSFMLLVFG
N315 IAGIAILIVITLMNNGDKHAGETLTLSTGLIIKYFIAGMCASSAMLLPGISGSFMLLVFG
NCTC8325 IAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMCASSAMLLPGISGSFMLLVFG
Newman IAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMCASSAMLLPGISGSFMLLVFG
USA300_FPR3757 IAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMCASSAMLLPGISGSFMLLVFG
****************************.*******************************
COL VYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFV
N315 VYGTVMLAISEVVKLNFTGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFV
NCTC8325 VYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFV
Newman VYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFV
USA300_FPR3757 VYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFV
*****************:******************************************
COL VGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
N315 VGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
NCTC8325 VGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
Newman VGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
USA300_FPR3757 VGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
*******************************************