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PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN002900000
  • symbol?: int
  • synonym:
  • description?: site-specific integrase

      descriptions from strain specific annotations:

    • site-specific integrase
    • tyrosine-type recombinase/integrase
    • integrase
    • phage integrase family protein
    • phage-related integrase
  • strand?: -
  • coordinates?: 3345045..3345605
  • synteny block?: BlockID0020660
  • occurrence?: in 24% of 34 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    JSNZ:
    04-02981:
    SA2981_0802
    08BA02176:
    11819-97:
    6850:
    71193:
    ECT-R 2:
    ED133:
    ED98:
    SAAV_0818
    HO 5096 0412:
    JH1:
    SaurJH1_0864
    JH9:
    SaurJH9_0848
    JKD6008:
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_0843 (int)
    Mu50:
    SAV0847 (int)
    MW2:
    RF122:
    SAB0779c
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    VC40:

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues: