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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003019000
- symbol?: —
- synonym:
- description?: DUF72 domain-containing protein
- DUF72 domain-containing protein
- putative DUF72-containing protein
- conserved protein YunF
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3411558..3412427
- synteny block?: BlockID0021270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0876
08BA02176:
C248_0921
11819-97:
MS7_0877
6850:
RSAU_000800
71193:
ST398NM01_0905
ECT-R 2:
ECTR2_777
ED133:
SAOV_0868
ED98:
SAAV_0882
HO 5096 0412:
SAEMRSA15_07520
JH1:
SaurJH1_0939
JH9:
SaurJH9_0920
JKD6008:
SAA6008_00873
JKD6159:
SAA6159_00781
LGA251:
SARLGA251_08400
M013:
M013TW_0841
MRSA252:
SAR0884
MSHR1132:
SAMSHR1132_07740
MSSA476:
SAS0792
Mu3:
SAHV_0916
Mu50:
SAV0921
MW2:
MW0804
RF122:
SAB0788
ST398:
SAPIG0905
T0131:
SAT0131_00952
TCH60:
HMPREF0772_12325
TW20:
SATW20_09220
USA300_TCH1516:
USA300HOU_0882
VC40:
SAVC_03785
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYAIQPERNILKWIKETPD
N315 MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYAIQPERNILKWIKETPD
NCTC8325 MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYAIQPERNILKWIKETPD
Newman MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYAIQPERNILKWIKETPD
USA300_FPR3757 MINIGLTGWGDHYSLYEDLERQTDKLKTYAGHFPVVELDATYYAIQPERNILKWIKETPD
************************************************************
COL TFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQKKLAMVLVQFPPWFDCNA
N315 TFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQKKLAMVLVQFPPWFDCNA
NCTC8325 TFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQKKLAMVLVQFPPWFDCNA
Newman TFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQKKLAMVLVQFPPWFDCNA
USA300_FPR3757 TFEFVVKIHQALTLHADYKTFADTRQELFDQFKNMLEPLHTQKKLAMVLVQFPPWFDCNA
************************************************************
COL QNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFLTEHQIIHAVVDEPQVKDGSV
N315 QNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFLTEHQIIHAVVDEPQVKDGSV
NCTC8325 QNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFLTEHQIIHAVVDEPQVKDGSV
Newman QNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFLTEHQIIHAVVDEPQVKDGSV
USA300_FPR3757 QNIKYILYVRQQLQAFPMCVEFRHQSWFSDAFKEQTLAFLTEHQIIHAVVDEPQVKDGSV
************************************************************
COL PLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRYLYDYNEQELIDLAQKAQILAQK
N315 PLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRYLYDYNEQELIDLAQKAQILAQK
NCTC8325 PLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRYLYDYNEQELIDLAQKAQILAQK
Newman PLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRYLYDYNEQELIDLAQKAQILAQK
USA300_FPR3757 PLVNRITNEIAFVRYHGRNHYGWTKKDMSDQEWRDVRYLYDYNEQELIDLAQKAQILAQK
************************************************************
COL AKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAPQQLKLF
N315 AKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAPQQLKLF
NCTC8325 AKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAPQQLKLF
Newman AKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAPQQLKLF
USA300_FPR3757 AKKVYVIFNNNSGGHAANNAKTYQRLLNIEYEGLAPQQLKLF
******************************************