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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003022000
- symbol?: lipA
- synonym:
- description?: lipoyl synthase
- lipoyl synthase
- lipoate synthase
- lipoic acid synthetase
- Lipoyl synthase, LipA
- putative lipoic acid synthetase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3414643..3415614
- synteny block?: BlockID0021300
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0879 (lipA)
08BA02176:
C248_0924 (lipA)
11819-97:
MS7_0880 (lipA)
6850:
RSAU_000803 (lipA)
71193:
ST398NM01_0908
ECT-R 2:
ECTR2_780 (lipA)
ED133:
SAOV_0871
ED98:
SAAV_0885 (lipA)
HO 5096 0412:
SAEMRSA15_07550 (lipA)
JH1:
SaurJH1_0942
JH9:
SaurJH9_0923
JKD6008:
SAA6008_00876 (lipA)
JKD6159:
SAA6159_00784 (lipA)
LGA251:
SARLGA251_08430 (lipA)
M013:
M013TW_0844
MRSA252:
SAR0887 (lipA)
MSHR1132:
SAMSHR1132_07770
MSSA476:
SAS0795
Mu3:
SAHV_0919 (lipA)
Mu50:
SAV0924 (lipA)
MW2:
MW0807 (lipA)
RF122:
SAB0791
ST398:
SAPIG0908 (lipA)
T0131:
SAT0131_00955 (rsbV)
TCH60:
HMPREF0772_12322 (lipA)
TW20:
SATW20_09250 (lipA)
USA300_TCH1516:
USA300HOU_0885 (lipA)
VC40:
SAVC_03800
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEAKCPNIHECWGARRTAT
N315 MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEAKCPNIHECWGARRTAT
NCTC8325 MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEAKCPNIHECWGARRTAT
Newman MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEAKCPNIHECWGARRTAT
USA300_FPR3757 MATKNEEILRKPDWLKIKLNTNENYTGLKKMMREKNLNTVCEEAKCPNIHECWGARRTAT
************************************************************
COL FMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGS
N315 FMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGS
NCTC8325 FMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGS
Newman FMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGS
USA300_FPR3757 FMILGAVCTRACRFCAVKTGLPNELDLNEPERVAESVELMNLKHVVITAVARDDLRDAGS
************************************************************
COL NVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASRPDILNHNIETVRRLTPRVRA
N315 NVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASRPDILNHNIETVRRLTPRVRA
NCTC8325 NVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASRPDILNHNIETVRRLTPRVRA
Newman NVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASRPDILNHNIETVRRLTPRVRA
USA300_FPR3757 NVYAETVRKVRERNPFTTIEILPSDMGGDYDALETLMASRPDILNHNIETVRRLTPRVRA
************************************************************
COL RATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEIYETMDDLRANDVDILTIGQYLQ
N315 RATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEIYETMDDLRANDVDILTIGQYLQ
NCTC8325 RATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEIYETMDDLRANDVDILTIGQYLQ
Newman RATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEIYETMDDLRANDVDILTIGQYLQ
USA300_FPR3757 RATYDRTLEFLRRSKELQPDIPTKSSIMVGLGETIEEIYETMDDLRANDVDILTIGQYLQ
************************************************************
COL PSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGPLVRSSYHADEQVNEAAKEKQRQGE
N315 PSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGPLVRSSYHADEQVNEAAKEKQRQGE
NCTC8325 PSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGPLVRSSYHADEQVNEAAKEKQRQGE
Newman PSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGPLVRSSYHADEQVNEAAKEKQRQGE
USA300_FPR3757 PSRKHLKVQKYYTPLEFGKLRKVAMDKGFKHCQAGPLVRSSYHADEQVNEAAKEKQRQGE
************************************************************
COL AQLNS
N315 AQLNS
NCTC8325 AQLNS
Newman AQLNS
USA300_FPR3757 AQLNS
*****