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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003121000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- major facilitator superfamily protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3503701..3508117
- synteny block?: BlockID0022130
- occurrence?: in 82% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0934
08BA02176:
—
11819-97:
MS7_0934
6850:
RSAU_000855
71193:
—
ECT-R 2:
ECTR2_834
ED133:
SAOV_0925
ED98:
SAAV_0940
HO 5096 0412:
SAEMRSA15_08080
JH1:
SaurJH1_0997
JH9:
SaurJH9_0978
JKD6008:
SAA6008_00932
JKD6159:
—
LGA251:
SARLGA251_08960
M013:
M013TW_0901
MRSA252:
SAR0942
MSHR1132:
—
MSSA476:
SAS0849
Mu3:
SAHV_0974
Mu50:
SAV0979
MW2:
MW0861
RF122:
—
ST398:
—
T0131:
SAT0131_01012 (atpA)
TCH60:
HMPREF0772_12266
TW20:
SATW20_09780
USA300_TCH1516:
USA300HOU_0938
VC40:
SAVC_04065
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKLILGIYLYRIFSRAYFYLPFLLIYFLIQGYSIIQLEILMASYGIAAFLFSLYKEKCF
N315 MNKLILGIYLYRIFSRAYFYLPFLLIYFLIQGYSIIQLEILMASYGIAAFLFSLYKEKCF
NCTC8325 MNKLILGIYLYRIFSRAYFYLPFLLIYFLIQGYSIIQLEILMASYGIAAFLFSLYKEKCF
Newman MNKLILGIYLYRIFSRAYFYLPFLLIYFLIQGYSIIQLEILMASYGIAAFLFSLYKEKCF
USA300_FPR3757 MNKLILGIYLYRIFSRAYFYLPFLLIYFLIQGYSIIQLEILMASYGIAAFLFSLYKEKCF
************************************************************
COL KICNLKDSNKLVVSEIFKIIGLLLLLYQNQYLILVVAQILLGLSYSMMAGVDTAIIKRNI
N315 KICNLKDSNKLVVSEIFKIIGLLLLLYQNQYLILVVAQILLGLSYSMMAGVDTAIIKRNI
NCTC8325 KICNLKDSNKLVVSEIFKIIGLLLLLYQNQYLILVVAQILLGLSYSMMAGVDTAIIKRNI
Newman KICNLKDSNKLVVSEIFKIIGLLLLLYQNQYLILVVAQILLGLSYSMMAGVDTAIIKRNI
USA300_FPR3757 KICNLKDSNKLVVSEIFKIIGLLLLLYQNQYLILVVAQILLGLSYSMMAGVDTAIIKRNI
************************************************************
COL TNEKYVQNKSNSYMFLSLLISGIIGSYLYGINIKWPIIMTGIFSILTIIIIRCTLVENRE
N315 TNEKYVQNKSNSYMFLSLLISGIIGSYLYGINIKWPIIMTGIFSILTIIIIRCTLVENRE
NCTC8325 TNEKYVQNKSNSYMFLSLLISGIIGSYLYGINIKWPIIMTGIFSILTIIIIRCTLVENRE
Newman TNEKYVQNKSNSYMFLSLLISGIIGSYLYGINIKWPIIMTGIFSILTIIIIRCTLVENRE
USA300_FPR3757 TNEKYVQNKSNSYMFLSLLISGIIGSYLYGINIKWPIIMTGIFSILTIIIIRCTLVENRE
************************************************************
COL LNLIGETKGKIKKFLPEEKFWILHYSFLRALILGFFIGFIPINIYNDLKLNNLQFISVLT
N315 LNLIGETKGKIKKFLPEEKFWILHYSFLRALILGFFIGFIPINIYNDLKLNNLQFISVLT
NCTC8325 LNLIGETKGKIKKFLPEEKFWILHYSFLRALILGFFIGFIPINIYNDLKLNNLQFISVLT
Newman LNLIGETKGKIKKFLPEEKFWILHYSFLRALILGFFIGFIPINIYNDLKLNNLQFISVLT
USA300_FPR3757 LNLIGETKGKIKKFLPEEKFWILHYSFLRALILGFFIGFIPINIYNDLKLNNLQFISVLT
************************************************************
COL CYTVMGFVSSRYLTKYLNYKFVSEICLVIFLIIYTYQSFIAVTISMIFLGISSGLTRPQT
N315 CYTVMGYLSSRYLTKYLNYKFVSEICLIIFLIIYTYQSFIAVTISMIFLGISSGLTRPQT
NCTC8325 CYTVMGFVSSRYLTKYLNYKFVSEICLVIFLIIYTYQSFIAVTISMIFLGISSGLTRPQT
Newman CYTVMGFVSSRYLTKYLNYKFVSEICLVIFLIIYTYQSFIAVTISMIFLGISSGLTRPQT
USA300_FPR3757 CYTVMGFVSSRYLTKYLNYKFVSEICLVIFLIIYTYQSFIAVTISMIFLGISSGLTRPQT
******::*******************:********************************
COL INKLSSSSNLRVMLNYAETLYFIFNIAFLLMGGYLYTIGTIQYLILFISLLIFIYLIIIF
N315 INKLSSSSNLRVMLNYAETLYFIFNIAFLLIGGYLYSIGTIQYLMLFMSLLTFIYLLTLF
NCTC8325 INKLSSSSNLRVMLNYAETLYFIFNIAFLLMGGYLYTIGTIQYLILFISLLIFIYLIIIF
Newman INKLSSSSNLRVMLNYAETLYFIFNIAFLLMGGYLYTIGTIQYLILFISLLIFIYLIIIF
USA300_FPR3757 INKLSSSSNLRVMLNYAETLYFIFNIAFLLMGGYLYTIGTIQYLILFISLLIFIYLIIIF
******************************:*****:*******:**:*** ****: :*
COL YFTRREQHENKN--
N315 YL-RRDQHENQHRI
NCTC8325 YFTRREQHENKN--
Newman YFTRREQHENKN--
USA300_FPR3757 YFTRREQHENKN--
*: **:****::