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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003225000
- symbol?: —
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC transporter, ATP-binding protein, putative
- bacteriocin ABC transporter ATP-binding protein
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter, ATP-binding protein
- ABC transporter family protein
- pseudogene
- putative bacteriocin export ABC transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3607773..3608123
- synteny block?: BlockID0023110
- occurrence?: in 97% of 33 strains
lcnD: lactococcin 972-like bacteriocin ABC transporter ATP binding subunit [1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0988
08BA02176:
C248_1058
11819-97:
MS7_0990
6850:
RSAU_000925
71193:
ST398NM01_1031
ECT-R 2:
ECTR2_889
ED133:
SAOV_0979
ED98:
SAAV_0997
HO 5096 0412:
SAEMRSA15_08640
JH1:
SaurJH1_1115
JH9:
SaurJH9_1093
JKD6008:
SAA6008_00987
JKD6159:
SAA6159_00889
LGA251:
SARLGA251_09480
M013:
M013TW_0963
MRSA252:
SAR1004
MSHR1132:
SAMSHR1132_08810
MSSA476:
SAS0968
Mu3:
SAHV_1028
Mu50:
SAV1035
MW2:
MW0916
RF122:
SAB0898
ST398:
SAPIG1031
T0131:
SAT0131_01067
TCH60:
HMPREF0772_12202
TW20:
SATW20_10300
USA300_TCH1516:
—
VC40:
SAVC_04330
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
N315 MIELKDLTIQKGNIHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
NCTC8325 MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
Newman MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
USA300_FPR3757 MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
************* **********************************************
COL NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
N315 NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQLKIRYIEQF
NCTC8325 NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
Newman NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
USA300_FPR3757 NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
***************************************************:********
COL GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
N315 GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFDLVD
NCTC8325 GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
Newman GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
USA300_FPR3757 GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
********************************************************.***
COL ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
N315 ENKVLILATHDMAIANQCDEIIDLEQYSKVASM
NCTC8325 ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
Newman ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
USA300_FPR3757 ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
*************************** *****
- ↑ Seven Nazipi, Sofie G Vangkilde-Pedersen, Mette Marie Busck, Dorthe Kirstine Lund, Ian P G Marshall, Trine Bilde, Marie Braad Lund, Andreas Schramm
An antimicrobial Staphylococcus sciuri with broad temperature and salt spectrum isolated from the surface of the African social spider, Stegodyphus dumicola.
Antonie Van Leeuwenhoek: 2021, 114(3);325-335
[PubMed:33543432] [WorldCat.org] [DOI] (I p)M J van Belkum, R W Worobo, M E Stiles
Double-glycine-type leader peptides direct secretion of bacteriocins by ABC transporters: colicin V secretion in Lactococcus lactis.
Mol Microbiol: 1997, 23(6);1293-301
[PubMed:9106219] [WorldCat.org] [DOI] (P p)