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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003225000
- symbol?: —
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC transporter, ATP-binding protein, putative
- bacteriocin ABC transporter ATP-binding protein
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter, ATP-binding protein
- ABC transporter family protein
- pseudogene
- putative bacteriocin export ABC transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3607773..3608123
- synteny block?: BlockID0023110
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0988
08BA02176:
C248_1058
11819-97:
MS7_0990
6850:
RSAU_000925
71193:
ST398NM01_1031
ECT-R 2:
ECTR2_889
ED133:
SAOV_0979
ED98:
SAAV_0997
HO 5096 0412:
SAEMRSA15_08640
JH1:
SaurJH1_1115
JH9:
SaurJH9_1093
JKD6008:
SAA6008_00987
JKD6159:
SAA6159_00889
LGA251:
SARLGA251_09480
M013:
M013TW_0963
MRSA252:
SAR1004
MSHR1132:
SAMSHR1132_08810
MSSA476:
SAS0968
Mu3:
SAHV_1028
Mu50:
SAV1035
MW2:
MW0916
RF122:
SAB0898
ST398:
SAPIG1031
T0131:
SAT0131_01067
TCH60:
HMPREF0772_12202
TW20:
SATW20_10300
USA300_TCH1516:
—
VC40:
SAVC_04330
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
N315 MIELKDLTIQKGNIHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
NCTC8325 MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
Newman MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
USA300_FPR3757 MIELKDLTIQKGNTHILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYF
************* **********************************************
COL NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
N315 NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQLKIRYIEQF
NCTC8325 NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
Newman NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
USA300_FPR3757 NGQLEQFKSNFYRDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQIKIRYIEQF
***************************************************:********
COL GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
N315 GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFDLVD
NCTC8325 GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
Newman GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
USA300_FPR3757 GLSNSLKRKVHTLSGGEQQRVALIRMMLKDPIVMLADEPTGALDPKTGQMIIQSLFGLVD
********************************************************.***
COL ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
N315 ENKVLILATHDMAIANQCDEIIDLEQYSKVASM
NCTC8325 ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
Newman ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
USA300_FPR3757 ENKVLILATHDMAIANQCDEIIDLEQYRKVASM
*************************** *****