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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003321000
- symbol?: —
- synonym:
- description?: putative UPF0223-domain protein
- putative UPF0223-domain protein
- UPF0223 family protein
- protein //
- putative transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3689473..3689806
- synteny block?: BlockID0024050
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1054
08BA02176:
C248_1124
11819-97:
MS7_1054
6850:
RSAU_000982
71193:
ST398NM01_1094
ECT-R 2:
ECTR2_952
ED133:
SAOV_1041
ED98:
SAAV_1062
HO 5096 0412:
SAEMRSA15_09270
JH1:
SaurJH1_1179
JH9:
SaurJH9_1157
JKD6008:
SAA6008_01052
JKD6159:
SAA6159_00953
LGA251:
SARLGA251_10100
M013:
M013TW_1029
MRSA252:
SAR1071
MSHR1132:
SAMSHR1132_09440
MSSA476:
SAS1032
Mu3:
SAHV_1089
Mu50:
SAV1097
MW2:
MW0980
RF122:
SAB0963
ST398:
SAPIG1094
T0131:
SAT0131_01135 (asp23)
TCH60:
HMPREF0772_12135
TW20:
SATW20_10920
USA300_TCH1516:
USA300HOU_1040
VC40:
SAVC_04645
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIF
N315 MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIF
NCTC8325 MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIF
Newman MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIF
USA300_FPR3757 MEYEYPIDLDWSNEEMISVINFFNHVEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIF
************************************************************
COL NTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK
N315 NTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK
NCTC8325 NTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK
Newman NTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK
USA300_FPR3757 NTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK
*******************************