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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003332000
- symbol?: —
- synonym:
- description?: DUF1054 family protein
- DUF1054 family protein
- putative DUF1054-containing protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3699412..3700026
- synteny block?: BlockID0024160
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1063
08BA02176:
C248_1133
11819-97:
MS7_1063
6850:
RSAU_000991
71193:
ST398NM01_1103
ECT-R 2:
ECTR2_961
ED133:
SAOV_1050c
ED98:
SAAV_1072
HO 5096 0412:
SAEMRSA15_09360
JH1:
SaurJH1_1188
JH9:
SaurJH9_1166
JKD6008:
SAA6008_01061
JKD6159:
SAA6159_00962
LGA251:
SARLGA251_10190
M013:
M013TW_1038
MRSA252:
SAR1080
MSHR1132:
SAMSHR1132_09530
MSSA476:
SAS1041
Mu3:
SAHV_1098
Mu50:
SAV1106
MW2:
MW0989
RF122:
SAB0972c
ST398:
SAPIG1103
T0131:
SAT0131_01145
TCH60:
HMPREF0772_12126
TW20:
SATW20_11010
USA300_TCH1516:
—
VC40:
SAVC_04695
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLRELGEYFSDFFTSQTGETFYPHVAKH
N315 MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLHELGEYFSDFFTSQTGETFYPHVAKH
NCTC8325 MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLRELGEYFSDFFTSQTGETFYPHVAKH
Newman MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLRELGEYFSDFFTSQTGETFYPHVAKH
USA300_FPR3757 MTKYTFKPKDFKAFNVEGLDARMEALNEYIRPQLRELGEYFSDFFTSQTGETFYPHVAKH
**********************************:*************************
COL ARRSVNPPKDTWVAFATNKRGYKMLPHFQIGMFEDQLFVMFGIMHEAKDKATRAKVFERK
N315 ARRSVNAPKDTWVAFATSKRGYKMLPHFQIGMFEDQLFVMFGIMHEAKDKATRAKVFERK
NCTC8325 ARRSVNPPKDTWVAFATNKRGYKMLPHFQIGMFEDQLFVMFGIMHEAKDKATRAKVFERK
Newman ARRSVNPPKDTWVAFATNKRGYKMLPHFQIGMFEDQLFVMFGIMHEAKDKATRAKVFERK
USA300_FPR3757 ARRSVNPPKDTWVAFATNKRGYKMLPHFQIGMFEDQLFVMFGIMHEAKDKATRAKVFERK
******.**********.******************************************
COL FKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLIEAIQRAINVKKGEFFIARAITPQDKR
N315 FKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLKEAIQRAINVKKGEFFIARAITPQDKR
NCTC8325 FKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLIEAIQRAINVKKGEFFIARAITPQDKR
Newman FKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLIEAIQRAINVKKGEFFIARAITPQDKR
USA300_FPR3757 FKAIQQLPDDYRVCLDHMKPDKPFIKDLTDDDLIEAIQRAINVKKGEFFIARAITPQDKR
********************************* **************************
COL LKSDKAFIAFLEETFDQFLPFYSA
N315 LKSDKAFIAFLEETFDQFLPFYSA
NCTC8325 LKSDKAFIAFLEETFDQFLPFYSA
Newman LKSDKAFIAFLEETFDQFLPFYSA
USA300_FPR3757 LKSDKAFIAFLEETFDQFLPFYSA
************************